DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUB3

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_568960.1 Gene:TUB3 / 836391 AraportID:AT5G62700 Length:450 Species:Arabidopsis thaliana


Alignment Length:435 Identity:151/435 - (34%)
Similarity:260/435 - (59%) Gaps:15/435 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            ||:.:|.||||||||.:||:.:|.||||.|.|.....:....:|.:|::.:|....::|||||:|
plant     3 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSL 132
            |||..::::.:.||.:.:..:|....:  .|||||||.| :::|.::.:.|.|::.:||:..|.|
plant    68 LEPGTMDSLRSGPYGQTFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130

  Fly   133 EGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTK 197
            :||.:|||:.||||||||:.::.::.|.:|.:::.|:||||: .::||.||:|||:.|::.:|.:
plant   131 QGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVE 194

  Fly   198 CADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIP 262
            .||..:||||.||..|....|.:.||:|..:|:|:|..||..|..||:|..:|::|..|..:|||
plant   195 NADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIP 259

  Fly   263 TPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQG 327
            .|:|||.|.|:.||.|  ......|..||.::.:::...||||.:| ..:..|  :::...:.:|
plant   260 FPRLHFFMVGFAPLTS--RGSQQYRSLTVPELTQQMWDSKNMMCAA-DPRHGR--YLTASAMFRG 319

  Fly   328 EVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFKRA 392
            ::...:|.:.:..::.:..:.|:.|.|.:::..:....|   :..|::...:.|.|.|..:|:|.
plant   320 KMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEMFRRV 381

  Fly   393 LAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            ..|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
plant   382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 149/432 (34%)
TUB3NP_568960.1 PLN00220 1..430 CDD:215107 151/435 (35%)

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