DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUB4

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_199247.1 Gene:TUB4 / 834459 AraportID:AT5G44340 Length:444 Species:Arabidopsis thaliana


Alignment Length:438 Identity:154/438 - (35%)
Similarity:263/438 - (60%) Gaps:21/438 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQ---DRKDVFFYQADDNHYIPRAV 65
            ||:.:|.||||||||.:||:.:|.||||...|   .:..|..   :|.||:|.:|....|:||||
plant     3 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTG---QYVGDSPLQLERIDVYFNEASGGKYVPRAV 64

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGS 129
            |:||||..::::.:.|:.:::..:|....:  .|||||||.| :::|.::.:.|.|::.:||:.|
plant    65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127

  Fly   130 DSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKR 194
            |.|:||.:|||:.||||||||:.::.::.|.:|.:::.|:||||: .::||.||:|||:.|::.:
plant   128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS-PKVSDTVVEPYNATLSVHQ 191

  Fly   195 LTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTAS 259
            |.:.||..:||||.||..|....|.:..|||..:|:|:|..||..|..||:|..:|::|..|..:
plant   192 LVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256

  Fly   260 LIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNI 324
            |||.|:|||.|.|:.||.|....:.|.  .:|.::.:::...||||.:| ..:..|  :::...:
plant   257 LIPFPRLHFFMVGFAPLTSRGSQQYSA--LSVPELTQQMWDAKNMMCAA-DPRHGR--YLTASAV 316

  Fly   325 IQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLF 389
            .:|::...:|.:.:..|:.:..:.|:.|.|.:::.::...:|   ...|::...:.|.|.|..:|
plant   317 FRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAP---KGLKMASTFIGNSTSIQEMF 378

  Fly   390 KRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            :|...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
plant   379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVAEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 152/435 (35%)
TUB4NP_199247.1 PLN00220 1..431 CDD:215107 154/438 (35%)

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