DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment gammaTub37C and GCP2

DIOPT Version :9

Sequence 1:	NP_001260565.1	Gene:	gammaTub37C / 35199	FlyBaseID:	FBgn0010097	Length:	457	Species:	Drosophila melanogaster
Sequence 2:	NP_196181.1	Gene:	GCP2 / 830445	AraportID:	AT5G05620	Length:	474	Species:	Arabidopsis thaliana

Alignment Length:	450	Identity:	327/450 - (72%)
Similarity:	378/450 - (84%)	Gaps:	4/450 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MPSEIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAV 65
            ||.||||||:||||||||.||||:||||||||.||:||||||.|.||||||||||||.||||||:
plant     1 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRAL 65

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEEVFDILDREADGSD 130
            ||||||||||.|....|..|||.||:|||.||||||||||||:.||:.|:||:.|::||||||||
plant    66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGKGVEEEIMDMIDREADGSD 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            ||||||||||||||||||||||:||.|::|:.|||:|||||||||.|.||||||||||:||||||
plant   131 SLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRL 195

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            |..||.|||||||||||||.||||:..|||.|.|:||||:||.||||||||.||||:|:||.|||
plant   196 TLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASL 260

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALT-DKQSRQC-FVSILN 323
            ||||:.||||||||||..:.:... :||||||||||||||.||:|||:.. :|::.|. ::||||
plant   261 IPTPRCHFLMTGYTPLTVERQANV-IRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILN 324

  Fly   324 IIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSL 388
            ||||||||:|||:||||||||||.|||.||||||||||.:.|||||::|:|||||:|:||.|..|
plant   325 IIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLASHTSIRHL 389

  Fly   389 FKRALAQYDKLRKRNAFLDNFRRESMFQD-DLTELDIARDTVDCLVQEYEAATQIDYPQW 447
            |.|.|:|||||||:.|||||:|:..||.| ||:|.|.:||.::.||.||:|....||.:|
plant   390 FSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKW 449

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
gammaTub37C	NP_001260565.1	PLN00222	1..447	CDD:215108	326/448 (73%)
gammaTub37C	NP_001260565.1	gamma_tubulin	4..436	CDD:276957	319/434 (74%)
GCP2	NP_196181.1	PLN00222	1..454	CDD:215108	326/449 (73%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	355	1.000	Domainoid score	I206
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H833
Inparanoid	1	1.050	658	1.000	Inparanoid score	I161
OMA	1	1.010	-	-		QHG53966
OrthoDB	1	1.010	-	-		D687389at2759
OrthoFinder	1	1.000	-	-		FOG0002428
OrthoInspector	1	1.000	-	-		mtm1185
orthoMCL	1	0.900	-	-		OOG6_101897
Panther	1	1.100	-	-	O	PTHR11588
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1612
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.840