DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUB9

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_193821.1 Gene:TUB9 / 827837 AraportID:AT4G20890 Length:444 Species:Arabidopsis thaliana


Alignment Length:437 Identity:154/437 - (35%)
Similarity:265/437 - (60%) Gaps:19/437 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDG-VLEDFATDGQ-DRKDVFFYQADDNHYIPRAVL 66
            ||:.:|.||||||||.:||:.:|.||||...| ...|  ||.| :|.:|:|.:|....|:|||||
plant     3 EILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGD--TDLQLERINVYFNEASGGKYVPRAVL 65

  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130
            :||||..::::.:.|:.:::..:|....:  .|||||||.| :::|.::.:.|.|::.:||:..|
plant    66 MDLEPGTMDSLRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD 128

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            .|:||.:|||:.||||||||:.::.::.|.:|.:::.|:||||: .::||.||:|||:.|::.:|
plant   129 CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS-PKVSDTVVEPYNATLSVHQL 192

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            .:.||..:||||.||..|....|.:..|||..:|:|:|..||..|..||:|..:|::|..|..:|
plant   193 VENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNL 257

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            ||.|:|||.|.|:.||.|....:.|.  .:|.::.:::...||||.:| ..:..|  :::...:.
plant   258 IPFPRLHFFMVGFAPLTSRGSQQYSA--LSVPELTQQMWDAKNMMCAA-DPRHGR--YLTASAVF 317

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFK 390
            :|::...:|.:.:..::.:..:.|:.|.|.:::.::...:|   :..|::...:.|.|.|..:|:
plant   318 RGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAP---TGLKMASTFIGNSTSIQEMFR 379

  Fly   391 RALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            |...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
plant   380 RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVAEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 152/434 (35%)
TUB9NP_193821.1 PLN00220 1..431 CDD:215107 154/437 (35%)

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