DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaTub37C and TUA6

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_193232.1 Gene:TUA6 / 827154 AraportID:AT4G14960 Length:450 Species:Arabidopsis thaliana


Alignment Length:442 Identity:136/442 - (30%)
Similarity:248/442 - (56%) Gaps:19/442 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVL 66
            |.|::.:||.|.|:|...|:..||||||.|||.:....|  .|.|..:.||.:.....::||||.
plant     3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVF 67

  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130
            :||||.||:.:.|..|.:|::.|.:...|.  .|.||:|.| ::.|:::.:...|.:.:.||...
plant    68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            .|:||::.:::.||||||:||.:|||||..:.||....::|:|: .::|..||:||||:|:...|
plant   131 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS-PQVSTSVVEPYNSVLSTHSL 194

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            .:..|..::|||.|:..|....|:|:.||:|.:|.|||.::|..|.:||:...:|.::.....:|
plant   195 LEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            :|.|::||:::.|.|::|  ..|....:.:|.::.....:|.:||  |..|.:..: :::...:.
plant   260 VPYPRIHFMLSSYAPVIS--AEKAFHEQLSVAEITNSAFEPASMM--AKCDPRHGK-YMACCLMY 319

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGL-----MMANHTGI 385
            :|:|.|..|:.::..|:.::...|:.|.|...:..:....|.|.....::.:     |::|.|.:
plant   320 RGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSV 384

  Fly   386 SSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            :.:|.|...::|.:..:.||:..:..|.|.:.:.:|   ||:.:..|.::||
plant   385 AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDLAALEKDYE 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 134/439 (31%)
TUA6NP_193232.1 PLN00221 1..450 CDD:177802 136/442 (31%)

Return to query results.
Submit another query.