DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUBB1

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_110400.1 Gene:TUBB1 / 81027 HGNCID:16257 Length:451 Species:Homo sapiens


Alignment Length:445 Identity:153/445 - (34%)
Similarity:259/445 - (58%) Gaps:35/445 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            ||:.:|:||||||||.:||:.:..||||...|.....:....:|..|::.:|....|:|||||:|
Human     3 EIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYVPRAVLVD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHG-GGAGNNWASG-FSQGEKVQEEVFDILDREADGSDS 131
            |||..:::|.:|....|: |.:.|:  || .|||||||.| :::|.::.|.|.:::..|::..|.
Human    68 LEPGTMDSIRSSKLGALF-QPDSFV--HGNSGAGNNWAKGHYTEGAELIENVLEVVRHESESCDC 129

  Fly   132 LEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLT 196
            |:||.:.||:.||||||||:.::.::.|.:|.:::.::||.|: .::||.||:|||::|::.:|.
Human   130 LQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPS-PKVSDTVVEPYNAVLSIHQLI 193

  Fly   197 KCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLI 261
            :.||:...:||.||..|....|.:.|||:..:|:|||..||..||:||:|..:|.:|..|..:::
Human   194 ENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMV 258

  Fly   262 PTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQ 326
            |.|:|||.|.|:.||.:  :.....|..:|.::.:::...:|.|  |..|.: |..::::..|.:
Human   259 PFPRLHFFMPGFAPLTA--QGSQQYRALSVAELTQQMFDARNTM--AACDLR-RGRYLTVACIFR 318

  Fly   327 GEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMA-----NH 382
            |::...:|.:.|..::.|..:.|:.|.|.:::||:    ||            ||.||     |:
Human   319 GKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPR------------GLSMAATFIGNN 371

  Fly   383 TGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            |.|..:|.|....:..:.||.||:..:..|.|   |:.|...|.:.:..||.||:
Human   372 TAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGM---DINEFGEAENNIHDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 153/445 (34%)
gamma_tubulin 4..436 CDD:276957 151/442 (34%)
TUBB1NP_110400.1 PTZ00010 1..428 CDD:240228 153/445 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..451
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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