DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and si:ch211-114n24.6

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001313524.1 Gene:si:ch211-114n24.6 / 795591 ZFINID:ZDB-GENE-120214-26 Length:451 Species:Danio rerio


Alignment Length:448 Identity:137/448 - (30%)
Similarity:237/448 - (52%) Gaps:31/448 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVL 66
            |.|::.:||.|.|:|...|:..||||||.|||.:....|  .|.|..:.||.:.....::||||.
Zfish     3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVF 67

  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130
            :||||.||:.:.|..|.:|::.|.:...|.  .|.||:|.| ::.|:::.:.|.|...:.||...
Zfish    68 VDLEPTVIDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIIDLVLDRTRKLADQCT 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            .|:||::.||..||||||..|.::||||..:.||....::::| ..::|..||:|||||||....
Zfish   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHTT 194

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            .:.:|...::||.|:..|....|.|:.||:|.:|.|:..|:|..|.:||:...:|.:|.....:|
Zfish   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQC------FV 319
            :|.|::||.:..|.|::|  ..|....:.:|.::.....:|.|.||         :|      ::
Zfish   260 VPYPRIHFPLATYAPVIS--AEKAYHEQLSVAEITNACFEPANQMV---------KCDPRHGKYM 313

  Fly   320 SILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGL-----MM 379
            :...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.:....|.|.....::.:     |:
Zfish   314 ACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 378

  Fly   380 ANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            :|.|.|:..:.|...::|.:..:.||:..:..|.|.:.:.:|   ||:.:..|.::||
Zfish   379 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDMAALEKDYE 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 135/445 (30%)
si:ch211-114n24.6NP_001313524.1 PTZ00335 1..440 CDD:185562 137/448 (31%)

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