DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tubg1

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001072509.1 Gene:tubg1 / 779964 XenbaseID:XB-GENE-491266 Length:451 Species:Xenopus tropicalis


Alignment Length:447 Identity:348/447 - (77%)
Similarity:402/447 - (89%) Gaps:1/447 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSEIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAV 65
            ||.||||||||||||||||||||:||.||||||:|::|:|||:|.||||||||||||.|||||||
 Frog     1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAV 65

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEEVFDILDREADGSD 130
            |:|||||||::|:.|||:.|||.||::||:||||||||||||||||||:.|::|||:||||||||
 Frog    66 LLDLEPRVIHSILNSPYANLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSD 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            ||||||||||||||||||:|||:||||::|:||||:|||||||||||:||||||||||:||||||
 Frog   131 SLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRL 195

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            |:.||.||||||||||||||:|||||.|:|:|||.|||||||.||||||||.||||:||||.|||
 Frog   196 TQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASL 260

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            ||||:|||||||||||.:| ::..|||||||||||||||||||:|||...|:|:..|:::|||||
 Frog   261 IPTPRLHFLMTGYTPLTTD-QSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNII 324

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFK 390
            ||||||:|||||||||||||||||||||||||||||.|.|||:.|||:||||||||||.|||||:
 Frog   325 QGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTNISSLFE 389

  Fly   391 RALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDYPQW 447
            |...||||||||.|||:.||:|.:|:|:..|||.:|:.|..|:.||.|||:.||..|
 Frog   390 RTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREIVQQLIDEYHAATRPDYISW 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 347/445 (78%)
gamma_tubulin 4..436 CDD:276957 338/431 (78%)
tubg1NP_001072509.1 gamma_tubulin 3..435 CDD:276957 338/432 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 379 1.000 Domainoid score I839
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H833
Inparanoid 1 1.050 738 1.000 Inparanoid score I600
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D267298at33208
OrthoFinder 1 1.000 - - FOG0002428
OrthoInspector 1 1.000 - - otm48482
Panther 1 1.100 - - O PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1612
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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