DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaTub37C and TUBG1

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_024306672.1 Gene:TUBG1 / 7283 HGNCID:12417 Length:538 Species:Homo sapiens


Alignment Length:533 Identity:349/533 - (65%)
Similarity:402/533 - (75%) Gaps:86/533 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSEIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAV 65
            ||.||||||||||||||||||||:||.||||||:|::|:|||:|.||||||||||||.|||||||
Human     1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAV 65

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEEVFDILDREADGSD 130
            |:|||||||::|:.|||:||||.||::||:||||||||||||||||||:.|::|||:||||||||
Human    66 LLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSD 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            ||||||||||||||||||:|||:||||::|:||||:|||||||||||:||||||||||:||||||
Human   131 SLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRL 195

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            |:.||.||||||||||||||:|||||.|:|:|||.|||||||.||||||||.||||:||||.|||
Human   196 TQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASL 260

  Fly   261 IPTPQLHFLMTGYTPLMSDCETK------------------------------------------ 283
            ||||:|||||||||||.:|...:                                          
Human   261 IPTPRLHFLMTGYTPLTTDQSVRAAFSVPGQAGPGPNRPCPSLSLFPTAPGATLCGPQGAALRDW 325

  Fly   284 --------------------------------------------TSVRKTTVLDVMRRLLQPKNM 304
                                                        .|||||||||||||||||||:
Human   326 HRVGDFLADLLSTLPLPLASAKEKPKGDCALSAGRVPVSLSYQVASVRKTTVLDVMRRLLQPKNV 390

  Fly   305 MVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQ 369
            |||...|:|:..|:::|||||||||||:|||||||||||||||||||||||||||||.|.|||:.
Human   391 MVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLP 455

  Fly   370 SAHKVSGLMMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQ 434
            |||:||||||||||.|||||:|...||||||||.|||:.||:|.||:|:..|:|.:|:.|..|:.
Human   456 SAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLID 520

  Fly   435 EYEAATQIDYPQW 447
            ||.|||:.||..|
Human   521 EYHAATRPDYISW 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 348/531 (66%)
gamma_tubulin 4..436 CDD:276957 339/517 (66%)
TUBG1XP_024306672.1 gamma_tubulin 3..522 CDD:276957 339/518 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 381 1.000 Domainoid score I843
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H833
Inparanoid 1 1.050 739 1.000 Inparanoid score I596
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53966
OrthoDB 1 1.010 - - D267298at33208
OrthoFinder 1 1.000 - - FOG0002428
OrthoInspector 1 1.000 - - mtm8608
orthoMCL 1 0.900 - - OOG6_101897
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1481
SonicParanoid 1 1.000 - - X1612
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.870

Return to query results.
Submit another query.