DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and Tubb6

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_080749.2 Gene:Tubb6 / 67951 MGIID:1915201 Length:447 Species:Mus musculus


Alignment Length:440 Identity:151/440 - (34%)
Similarity:256/440 - (58%) Gaps:25/440 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGI-SPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLI 67
            ||:.:|.||||||||.:||:.:..|||| ...|.:.|.|.. .:|..|::.::....|:|||.|:
Mouse     3 EIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSALQ-LERISVYYNESSSKKYVPRAALV 66

  Fly    68 DLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDS 131
            ||||..::::.:.|:.:|:..:|....:  .|||||||.| :::|.::.:.|.|::.:|.:..|.
Mouse    67 DLEPGTMDSVRSGPFGQLFRPDNFIFGQ--TGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDC 129

  Fly   132 LEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLT 196
            |:||.|.||:.||||||||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:|.
Mouse   130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPS-PKVSDTVVEPYNATLSVHQLV 193

  Fly   197 KCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLI 261
            :..|....:||.||..|....|.:.|||:..:|:|||..||..||:||:|..:|.:|..|..:::
Mouse   194 ENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMV 258

  Fly   262 PTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQ 326
            |.|:|||.|.|:.||.:  ......|..||.::.:::...|||| :|...:..|  ::::..:.:
Mouse   259 PFPRLHFFMPGFAPLTA--RGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGR--YLTVATVFR 318

  Fly   327 GEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGISS 387
            |.:...:|.:.:..|:.:..:.|:.|.|.:::||:    ||..       |::...:.|.|.|..
Mouse   319 GPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGL-------KMASTFIGNSTAIQE 376

  Fly   388 LFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            ||||...|:..:.:|.|||..|..|.|.:.:.||   |...::.||.||:
Mouse   377 LFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTE---AESNMNDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 151/440 (34%)
gamma_tubulin 4..436 CDD:276957 149/437 (34%)
Tubb6NP_080749.2 PLN00220 1..431 CDD:215107 151/440 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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