Protein Alignment gammaTub37C and Tubb1

DIOPT Version :9

• Sequence 1: NP_001260565.1
• Gene: gammaTub37C / 35199
• FlyBaseID: FBgn0010097
• Length: 457
• Species: Drosophila melanogaster
• Sequence 2: XP_003749686.1
• Gene: Tubb1 / 679312
• RGDID: 1589557
• Length: 452
• Species: Rattus norvegicus
• Alignment Length: 445
• Identity: 154/445 - (34%)
• Similarity: 260/445 - (58%)
• Gaps: 35/445 - (7%)

  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            ||:.:|:||||||||.:||:.:..||||...|.....:....:|..|::.:|....|:|||||:|
  Rat     3 EIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYVPRAVLVD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHG-GGAGNNWASG-FSQGEKVQEEVFDILDREADGSDS 131
            |||..:::|.:|....|: |.:.|:  || .|||||||.| :::|.::.|.|.|::.||::..|.
  Rat    68 LEPGTMDSIRSSRLGILF-QPDSFV--HGNSGAGNNWAKGHYTEGAELIETVMDVVRRESESCDC 129

  Fly   132 LEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLT 196
            |:||.:.||:.||||||||:.::.::.|.:|.:::.::||.|: .::||.||:|||::|::.:|.
  Rat   130 LQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPS-PKVSDTVVEPYNAVLSIHQLI 193

  Fly   197 KCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLI 261
            :..|:...:||.||..|....|.:.|||:..:|:|||..||..||:||:|..:|.:|..|..:::
  Rat   194 ENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMV 258

  Fly   262 PTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQ 326
            |.|:|||.|.|:.||.:  :.....|..:|.::.:::...:|:| :|...::.|  ::::..|.:
  Rat   259 PFPRLHFFMPGFAPLTA--QGSQQYRALSVAELTQQMFDARNIM-AACDPRRGR--YLTVACIFR 318

  Fly   327 GEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMA-----NH 382
            |::...:|.:.|..|:.|....|:.|.|.:::||:    ||            ||.||     |:
  Rat   319 GKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPR------------GLNMAATFLGNN 371

  Fly   383 TGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            |.|..||.|....:..:.:|.||:..:..|.|   |::|...|...:..||.||:
  Rat   372 TAIQELFTRVSEHFSAMFRRRAFVHWYTSEGM---DISEFGEAEADILDLVSEYQ 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaTub37C	NP_001260565.1	PLN00222	1..447	CDD:215108	154/445 (35%)
		gamma_tubulin	4..436	CDD:276957	152/442 (34%)
Tubb1	XP_003749686.1	PTZ00010	1..428	CDD:240228	154/445 (35%)
		beta_tubulin	2..426	CDD:276956	154/445 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810