DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and Tubd1

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001185974.1 Gene:Tubd1 / 56427 MGIID:1891826 Length:486 Species:Mus musculus


Alignment Length:471 Identity:127/471 - (26%)
Similarity:207/471 - (43%) Gaps:119/471 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IITLQLGQCGNQIGFEFWKRL-----CLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRA 64
            |:|:||||||||||||.:..|     | ..|:......|.:....::|   ||.:.::...:.||
Mouse     3 IVTVQLGQCGNQIGFEVFDALFRDSHC-SQGLCSKRDNEAYQASCRER---FFREEENGVPVARA 63

  Fly    65 VLIDLEPRVINNIMTSPYSK---LYNQENVFLSKHGGGAGNNWASGFS-QGEKVQEEVFDILDRE 125
            ||:|:||:|||..::.....   .|.|...|..|.  |:|||||.|:| .|.|.:|.:.:::..|
Mouse    64 VLVDMEPKVINQTLSKAAQSGRWNYGQHTSFCQKQ--GSGNNWAYGYSVHGPKHEESIMNLIQTE 126

  Fly   126 ADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSIL 190
            .:..|||.||.:..|:|||||||:|::|.::|.:::...|.....::|.  ...:|:||.|||||
Mouse   127 VEKCDSLSGFFIIMSMAGGTGSGLGAFVTQKLQDQYSSSLKMNQIIWPY--GTGEVIVQNYNSIL 189

  Fly   191 TLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVS---------------------- 233
            ||..|.:.:|::::.:|.|:::|..:|::|:..:|..:|.:::                      
Mouse   190 TLSHLYRSSDALLIHENDAVHKICAKRMNIKQISFRDLNQVLAHQLGSVFQPTYSEDSSFHYRRN 254

  Fly   234 -----------------TIMSLSTTTLR-YPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDC 280
                             .:.|||.|.|. ||...:     |...|:|.|:...|.....|.||..
Mouse   255 PLDSGTVGPQACLMPRIFVWSLSATNLSFYPQTGD-----LMEHLVPHPEFKMLGVRNIPQMSAA 314

  Fly   281 ETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERK 345
            ....|.  .|...:::.|.|   |::|:...::.          |..:|.|             .
Mouse   315 SLAYSA--FTWAGLLKHLRQ---MLISSAKMEEG----------INWQVRP-------------P 351

  Fly   346 LANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFKRALAQYDKLRKR---NAFLD 407
            |....|.|.|              ||||      .:|      |..:||....||.|   :|.::
Mouse   352 LTGLPPIGKA--------------SAHK------EHH------FNTSLANLVVLRGREVHSADVE 390

  Fly   408 NFRRESMFQDDLTELD 423
            .|:..:::...|..:|
Mouse   391 GFKDPALYTSWLEPVD 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 127/471 (27%)
Tubd1NP_001185974.1 delta_zeta_tubulin-like 2..483 CDD:276958 127/471 (27%)

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