DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tuba5

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001015934.1 Gene:tuba5 / 548688 XenbaseID:XB-GENE-5788469 Length:449 Species:Xenopus tropicalis


Alignment Length:446 Identity:138/446 - (30%)
Similarity:239/446 - (53%) Gaps:27/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVL 66
            |.|::.:||.|.|||...|:..||||||.|||.:....|  .|.|..:.||.:.....::||||.
 Frog     3 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVF 67

  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130
            :|||..||:.:....|.:|::.|.:...|.  .|.||:|.| ::.|:::.:.|.:.:.:.||...
 Frog    68 VDLESAVIDEVRNGTYRQLFHPEQLITGKE--DAANNYARGHYTVGKEIIDLVLERVRKLADQCT 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            .|:||::.||..||||||..|.::||||..:.||....::::| ..::|..||:|||||||....
 Frog   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHTT 194

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            .:.:|...::||.|:..|....|.|:.||:|.:|.|:..|:|..|.:||:...:|.:|.....:|
 Frog   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            :|.|::||.:..|:|::|  ..|....:.:|.::.....:|.|.||..  |.:..: :::...:.
 Frog   260 VPYPRIHFPLVTYSPIIS--AEKAYHEQLSVSEITNACFEPSNQMVKC--DPRHGK-YMACCMLY 319

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSP-----YVQSAHKVSGLMMAN 381
            :|:|.|..|:.::..|:.::...|:.|.|...:|.:    |.:.|     .||.|    ..|::|
 Frog   320 RGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRA----VCMLSN 380

  Fly   382 HTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            .|.|:..:.|...::|.:..:.||:..:..|.|.:.:.:|   ||:.:..|.::||
 Frog   381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDLAALEKDYE 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 136/443 (31%)
tuba5NP_001015934.1 PTZ00335 1..448 CDD:185562 138/446 (31%)

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