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Protein Alignment gammaTub37C and Tubb1

DIOPT Version :10

Sequence 1:	NP_476922.1	Gene:	gammaTub37C / 35199	FlyBaseID:	FBgn0010097	Length:	457	Species:	Drosophila melanogaster
Sequence 2:	NP_001074440.1	Gene:	Tubb1 / 545486	MGIID:	107814	Length:	451	Species:	Mus musculus

Alignment Length:	445	Identity:	154/445 - (34%)
Similarity:	260/445 - (58%)	Gaps:	35/445 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            ||:.:|:||||||||.:||:.:..||||...|.....:....:|..|::.:|....|:|||||:|
Mouse     3 EIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSALQLERISVYYNEAYGKKYVPRAVLVD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHG-GGAGNNWASG-FSQGEKVQEEVFDILDREADGSDS 131
            |||..:::|.:|....|: |.:.|:  || .|||||||.| :::|.::.|.|.|::.||::..|.
Mouse    68 LEPGTMDSIRSSRLGVLF-QPDSFV--HGNSGAGNNWAKGHYTEGAELIENVMDVVRRESESCDC 129

  Fly   132 LEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLT 196
            |:||.:.||:.||||||||:.::.::.|.:|.:::.::||.|: .::||.||:|||::|::.:|.
Mouse   130 LQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPS-PKVSDTVVEPYNAVLSIHQLI 193

  Fly   197 KCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLI 261
            :..|:...:||.||..|....|.:.|||:..:|:|||..||..||:||:|..:|.:|..|..:::
Mouse   194 ENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMV 258

  Fly   262 PTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQ 326
            |.|:|||.|.|:.||.:  :.....|..:|.::.:::...:|:| :|...::.|  ::::..|.:
Mouse   259 PFPRLHFFMPGFAPLTA--QGSQQYRALSVAELTQQMFDARNIM-AACDPRRGR--YLTVACIFR 318

  Fly   327 GEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMA-----NH 382
            |::...:|.:.|..|:.|....|:.|.|.:::||:    ||            ||.||     |:
Mouse   319 GKMSTKEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPPR------------GLNMAATFLGNN 371

  Fly   383 TGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            |.|..||.|....:..:.:|.||:..:..|.|   |::|...|...:..||.||:
Mouse   372 TAIQELFTRVSEHFSAMFRRRAFVHWYTSEGM---DISEFGEAESDIHDLVSEYQ 423

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.