DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUBA8

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_061816.1 Gene:TUBA8 / 51807 HGNCID:12410 Length:449 Species:Homo sapiens


Alignment Length:448 Identity:134/448 - (29%)
Similarity:237/448 - (52%) Gaps:31/448 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVL 66
            |.|::.:||.|.|||...|:..||||||..||..:..|:  :..|....||.:..:..::||||:
Human     3 ECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGKHVPRAVM 67

  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130
            |||||.|::.:....|.:|::.|.:...|.  .|.||:|.| ::.|::..:.|.|.:.:..|...
Human    68 IDLEPTVVDEVRAGTYRQLFHPEQLITGKE--DAANNYARGHYTVGKESIDLVLDRIRKLTDACS 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            .|:||::.||..||||||..|.::||||..:.||....::::| ..::|..||:|||||||....
Human   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHTT 194

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            .:.:|...::||.|:..|....|.|:.||:|.:|.|:|.|:|..|.:||:...:|.:|.....:|
Human   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQC------FV 319
            :|.|::||.:..|.|::|  ..|....:.:|.::.....:|.:.||         :|      ::
Human   260 VPYPRIHFPLVTYAPIIS--AEKAYHEQLSVAEITSSCFEPNSQMV---------KCDPRHGKYM 313

  Fly   320 SILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGL-----MM 379
            :...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.:....|.|.....::.:     |:
Human   314 ACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 378

  Fly   380 ANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            :|.|.|:..:.|...::|.:..:.||:..:..|.|.:.:.:|   ||:.:..|.::||
Human   379 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDLAALEKDYE 433

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 132/445 (30%)
TUBA8NP_061816.1 PTZ00335 1..439 CDD:185562 134/448 (30%)