DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and CG7794

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster


Alignment Length:446 Identity:127/446 - (28%)
Similarity:229/446 - (51%) Gaps:31/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFF-YQADDNHYIPRAVLI 67
            |||.:.:||.|.||....|:..||||||..:|.|.....|  |....|| :.:......||.|:|
  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMD--DSFLTFFEFTSHQPCVQPRLVMI 68

  Fly    68 DLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFS-QGEKVQEEVFDILDREADGSDS 131
            |.||.||:.|.|..|..|::.:.:...|  ..:|:|:|.|:: ...::.:...:.:.|.||...:
  Fly    69 DTEPTVIDEIRTGSYRNLFHPDTLITGK--DDSGSNFARGYNLMASELLDRSMNAIRRVADRCRN 131

  Fly   132 LEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKL-IQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            |.||::..:|.||:|||:|:.::|||.|.|.||: :..:.|:|: ..||.|:|:|||::|.....
  Fly   132 LRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPS-PSISPVIVEPYNALLAAHFS 195

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            ..|||...::||.||..|....|::..||:|.:|.:::.::|..|.:.|:......:...|..:|
  Fly   196 MDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNL 260

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            :|.|::|:.:..|.||:....::.....|..|  ..:..|..|.||..   ..|...:::.:.:.
  Fly   261 VPYPRIHYPLINYAPLVPISHSQFVNMSTAQL--TGQCFQMSNQMVRC---NPSHGKYMASVLLY 320

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSG----------LMMA 380
            :|::.|::::.:|:.|:..:...|:.|.|...::.:....||.     |.|          :.::
  Fly   321 RGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYY-----VPGGDLAPTNRACVAIS 380

  Fly   381 NHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEY 436
            |:|.|...:.|.:.::|||.:|.||:.::..|.:.:.:..|   |.:.:..||.:|
  Fly   381 NNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNE---ASENICQLVHDY 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 127/446 (28%)
gamma_tubulin 4..436 CDD:276957 126/444 (28%)
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 127/446 (28%)
PTZ00335 6..439 CDD:185562 127/446 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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