DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tubd1

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001002093.1 Gene:tubd1 / 415183 ZFINID:ZDB-GENE-040625-73 Length:446 Species:Danio rerio


Alignment Length:459 Identity:127/459 - (27%)
Similarity:218/459 - (47%) Gaps:82/459 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRK-------DVFFYQADDNHYIP 62
            :::|||||||||||.|.:            .|:.| .::|.:||       :.||||......:.
Zfish     3 VVSLQLGQCGNQIGHELF------------SVISD-DSNGPNRKKYKQCSDERFFYQNSAGELVA 54

  Fly    63 RAVLIDLEPRVINNIMTSPYSK----LYNQENVFLSKHGGGAGNNWASGFS-QGEKVQEEVFDIL 122
            |:||:|:||:||:..:... ||    .|..:..|..|.  |:|||||:||. .|.:.:|:|.|::
Zfish    55 RSVLVDMEPKVISQALAKA-SKSGRWRYGDKAHFSQKQ--GSGNNWANGFCVHGPRHKEDVEDLV 116

  Fly   123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYN 187
            ..|.:..|.|.|.....|:|||||||:|:|:.:||.:.:|:..|.....:|.  ...:|:||.||
Zfish   117 RMEVERCDRLAGIFTMMSVAGGTGSGVGTYITQRLRDLYPQSFILNQVTWPY--GAGEVIVQNYN 179

  Fly   188 SILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMS---LSTTTLRYPSYM 249
            |:|||..|.:.:|:::|.:|..:::|.::.::|:..:.:.||.::|..::   ....|...|.|.
Zfish   180 SVLTLSHLYQLSDAILVHENDTVHKICSQLMNIKHISISDINKVISHQLASVLQPVYTAHSPDYY 244

  Fly   250 NNNLIG-LTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQ 313
            :.|.|| |..||:..|:...|.....|.||......||.....|  ::.|.|   |::::...::
Zfish   245 SRNPIGELLTSLVCHPEYKLLSLCNIPQMSSTSLAYSVFNWPGL--LKHLRQ---MLIASARMEE 304

  Fly   314 SRQCFVSILNII-QGEVDPSQV-HKSLQRIRERKLAN----------------------FIPWGP 354
            .....|::.::: .|....:.: |||.    ...|||                      ::||..
Zfish   305 GIDWTVNVPSVVLSGAESVTNIRHKSF----NSSLANLLILRGKDVSTAVTDGFKDPLLYVPWLK 365

  Fly   355 ASIQVALPRSSPYVQSAHKVSGLMMANHTG----ISSLFKRA---------LAQYDKLR-KRNAF 405
            |....: ..|||...:.::.|..:::|...    :.::.::|         :.||.|.. ....|
Zfish   366 AENSFS-TWSSPIPFNGYEKSATLVSNSQSLLKPLDNIVRKAWNMFASRAYIHQYTKFGISEEDF 429

  Fly   406 LDNF 409
            ||:|
Zfish   430 LDSF 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 127/459 (28%)
tubd1NP_001002093.1 delta_zeta_tubulin-like 2..445 CDD:276958 127/459 (28%)

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