DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tubb3

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_989408.1 Gene:tubb3 / 395045 XenbaseID:XB-GENE-5886292 Length:449 Species:Xenopus tropicalis


Alignment Length:442 Identity:151/442 - (34%)
Similarity:257/442 - (58%) Gaps:29/442 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQ---DRKDVFFYQADDNHYIPRAV 65
            ||:.:|.||||||||.:||:.:..||||.|.|   ::..|..   :|..|::.:|..:.|:|||:
 Frog     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPCG---NYIGDSDLQLERISVYYNEASSHKYVPRAI 64

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGS 129
            |:||||..::::.:..:..|:..:|....:  .|||||||.| :::|.::.:.|.|::.:|.:..
 Frog    65 LVDLEPGTMDSVRSGAFGHLFRPDNFIFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKECENC 127

  Fly   130 DSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKR 194
            |.|:||.|.||:.||||||||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:
 Frog   128 DCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSIHQ 191

  Fly   195 LTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTAS 259
            |.:..|....:||.||..|....|.:.|||:..:|:|||..||..||:||:|..:|.:|..|..:
 Frog   192 LVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVN 256

  Fly   260 LIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNI 324
            ::|.|:|||.|.|:.||.:  ......|..||.::.:::...|||| :|...:..|  ::::..:
 Frog   257 MVPFPRLHFFMPGFAPLTA--RGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGR--YLTVATV 316

  Fly   325 IQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGI 385
            .:|.:...:|.:.:..|:.:..:.|:.|.|.:::||:    ||..       |:|...:.|.|.|
 Frog   317 FRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGL-------KMSSTFIGNSTAI 374

  Fly   386 SSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            ..||||...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
 Frog   375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 149/439 (34%)
tubb3NP_989408.1 PLN00220 1..447 CDD:215107 151/442 (34%)

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