DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tubg1

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_957202.1 Gene:tubg1 / 393882 ZFINID:ZDB-GENE-040426-836 Length:451 Species:Danio rerio


Alignment Length:447 Identity:349/447 - (78%)
Similarity:401/447 - (89%) Gaps:1/447 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSEIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAV 65
            ||.||||||||||||||||||||:||.||||||:|::|:|||:|.||||||||||||.|||||||
Zfish     1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAV 65

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEEVFDILDREADGSD 130
            |:|||||||:.|:.|||:.|||.||::||:||||||||||||||||||:.|::|||:||||||||
Zfish    66 LLDLEPRVIHTILNSPYANLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSD 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            ||||||||||||||||||:|||:||||::|:||||:|||||||||||:||||||||||:||||||
Zfish   131 SLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRL 195

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            |:.||.||||||||||||||:|||||.|:|:|||.|||||||.||||||||.||||:||||.|||
Zfish   196 TQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASL 260

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            ||||:|||||||||||.:| ::..|||||||||||||||||||:|||...|:|:..|:::|||||
Zfish   261 IPTPRLHFLMTGYTPLTTD-QSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNII 324

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFK 390
            ||||||:|||||||||||||||||||||||||||||.|.|||:.|||:||||||||||.|||||:
Zfish   325 QGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRRSPYLPSAHRVSGLMMANHTSISSLFE 389

  Fly   391 RALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDYPQW 447
            |...||||||||.|||:.||:|.:|:|:..|||.:|:.|..||.||.|||:.||..|
Zfish   390 RTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREVVQQLVDEYSAATRPDYISW 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 348/445 (78%)
gamma_tubulin 4..436 CDD:276957 339/431 (79%)
tubg1NP_957202.1 gamma_tubulin 3..435 CDD:276957 339/432 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 379 1.000 Domainoid score I809
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H833
Inparanoid 1 1.050 742 1.000 Inparanoid score I573
OMA 1 1.010 - - QHG53966
OrthoDB 1 1.010 - - D267298at33208
OrthoFinder 1 1.000 - - FOG0002428
OrthoInspector 1 1.000 - - otm24382
orthoMCL 1 0.900 - - OOG6_101897
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1481
SonicParanoid 1 1.000 - - X1612
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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