DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and alphaTub67C

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:453 Identity:140/453 - (30%)
Similarity:244/453 - (53%) Gaps:30/453 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLE---------DFATDGQDRK----DVFFYQA 55
            |::::|:||||.|||...|:...|||||:.||.|:         ..|:.|.|..    ..||.:.
  Fly     3 EVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTET 67

  Fly    56 DDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVF 119
            .:...:||::.:||||.||:::......:||:.|.:...|.  .|.||:|.| :|.|::|.:.|.
  Fly    68 GNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKE--DAANNYARGRYSIGKEVIDRVT 130

  Fly   120 DILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQ 184
            ..|.:.|:..|||:||::.||:.||||||..|.::||||..:.||....::|:|: .::|..||:
  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPS-PKVSTAVVE 194

  Fly   185 PYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYM 249
            |||::||.......:|.|.::||.|:..|....|.:..|.:..:|.|::.|:|.:|.:||:...|
  Fly   195 PYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSM 259

  Fly   250 NNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQS 314
            |.:|.....:|:|.|::||.:..|.||||  ..:::..:..:..:.....:..||||..  |.::
  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMS--AERSAHEQHAITTLTNACFESSNMMVKC--DPRA 320

  Fly   315 RQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSP-YVQSAH--KVSG 376
            .: |::...:.:|:|.|..|:.::..|:.::...|:.|.|...::.:....| :|....  |.|.
  Fly   321 GK-FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSR 384

  Fly   377 --LMMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
              .|::|.|.||..|.....::|.:.|:.||:..:..|.|.:.:.||   ||:.:..|.:::|
  Fly   385 ACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTE---ARENIAVLERDFE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 139/450 (31%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 140/453 (31%)

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