DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and alphaTub67C

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:453 Identity:140/453 - (30%)
Similarity:244/453 - (53%) Gaps:30/453 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLE---------DFATDGQDRK----DVFFYQA 55
            |::::|:||||.|||...|:...|||||:.||.|:         ..|:.|.|..    ..||.:.
  Fly     3 EVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTET 67

  Fly    56 DDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVF 119
            .:...:||::.:||||.||:::......:||:.|.:...|.  .|.||:|.| :|.|::|.:.|.
  Fly    68 GNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKE--DAANNYARGRYSIGKEVIDRVT 130

  Fly   120 DILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQ 184
            ..|.:.|:..|||:||::.||:.||||||..|.::||||..:.||....::|:|: .::|..||:
  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPS-PKVSTAVVE 194

  Fly   185 PYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYM 249
            |||::||.......:|.|.::||.|:..|....|.:..|.:..:|.|::.|:|.:|.:||:...|
  Fly   195 PYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSM 259

  Fly   250 NNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQS 314
            |.:|.....:|:|.|::||.:..|.||||  ..:::..:..:..:.....:..||||..  |.::
  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMS--AERSAHEQHAITTLTNACFESSNMMVKC--DPRA 320

  Fly   315 RQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSP-YVQSAH--KVSG 376
            .: |::...:.:|:|.|..|:.::..|:.::...|:.|.|...::.:....| :|....  |.|.
  Fly   321 GK-FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSR 384

  Fly   377 --LMMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
              .|::|.|.||..|.....::|.:.|:.||:..:..|.|.:.:.||   ||:.:..|.:::|
  Fly   385 ACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTE---ARENIAVLERDFE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 140/453 (31%)
gamma_tubulin 4..436 CDD:276957 139/450 (31%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 140/453 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443472
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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