DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tubb5

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_942113.1 Gene:tubb5 / 386701 ZFINID:ZDB-GENE-031110-4 Length:444 Species:Danio rerio


Alignment Length:444 Identity:152/444 - (34%)
Similarity:255/444 - (57%) Gaps:33/444 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            ||:.:|.||||||||.:||:.:..||||.|.|.....:....||..|::.:|....|:|||:|:|
Zfish     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSL 132
            |||..::::.:.|:.:::..:|....:  .|||||||.| :::|.::.:.|.|::.:|::..|.|
Zfish    68 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCL 130

  Fly   133 EGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTK 197
            :||.|.||:.||||||||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:|.:
Zfish   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVE 194

  Fly   198 CADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIP 262
            ..|....:||.||..|....|.:.|||:..:|:|||..||..||.||:|..:|.:|..|..:::|
Zfish   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259

  Fly   263 TPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQG 327
            .|:|||.|.|:.||.|  ......|..||.::.:::...|||| :|...:..|  ::::..:.:|
Zfish   260 FPRLHFFMPGFAPLTS--RGSQQYRALTVPELTQQVFDAKNMM-AACDPRHGR--YLTVAAVFRG 319

  Fly   328 EVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMA-----NHT 383
            .:...:|.:.:..::.:..:.|:.|.|.:::.|:    ||            ||.||     |.|
Zfish   320 RMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR------------GLKMAVTFIGNST 372

  Fly   384 GISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            .|..||||...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
Zfish   373 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 150/441 (34%)
tubb5NP_942113.1 PLN00220 1..427 CDD:215107 152/444 (34%)

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