DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and betaTub60D

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0288686 Length:454 Species:Drosophila melanogaster


Alignment Length:455 Identity:151/455 - (33%)
Similarity:258/455 - (56%) Gaps:20/455 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQA------DDNHYIP 62
            ||:.||.||||||||.:||:.:..||||..:|:....:....:|..|::.:|      ....|:|
  Fly     3 EIVNLQAGQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYVP 67

  Fly    63 RAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREA 126
            ||:|:||||..:.::.:.||.:|:..:|....:  .|||||||.| :::|.::.:.|.|::.:|.
  Fly    68 RAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQ--SGAGNNWAKGHYTEGAELVDNVLDVVRKEC 130

  Fly   127 DGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILT 191
            :..|.|:||.|.||:.||||||||:.::.::.|.:|.:::.||||.|: .::||.||:|||:.|:
  Fly   131 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPS-PKVSDTVVEPYNATLS 194

  Fly   192 LKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGL 256
            :.:|.:..|....:||.||..|....|.:..|::..:|:|||..||..||.||:|..:|.:|..|
  Fly   195 IHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 259

  Fly   257 TASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSI 321
            ..:::|.|:|||.|.|:.||.|  ......|..||.::.:::...|||| :|...:..|  ::::
  Fly   260 AVNMVPFPRLHFFMPGFAPLTS--RGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGR--YLTV 319

  Fly   322 LNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGIS 386
            ..:.:|.:...:|.:.:..::.:..:.|:.|.|.:::.|:....|   ...|:|...:.|.|.|.
  Fly   320 AAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSSTFIGNTTAIQ 381

  Fly   387 SLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDYPQWSPAV 451
            .||||...|:..:.:|.|||..:..|.|.:.:.||.:...:.:....|:|:.||..|  ::.|.|
  Fly   382 ELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD--EFDPEV 444

  Fly   452  451
              Fly   445  444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 145/438 (33%)
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 151/455 (33%)

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