DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and Tubal3

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001427053.1 Gene:Tubal3 / 291287 RGDID:1305289 Length:446 Species:Rattus norvegicus


Alignment Length:459 Identity:138/459 - (30%)
Similarity:235/459 - (51%) Gaps:46/459 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQ---------DRK----DVFFYQA 55
            |.:::.:||.|.|||...|:..||||||.|||    |..|||         |.:    |.||::.
  Rat     3 ECLSIHIGQAGVQIGDACWELYCLEHGIQPDG----FILDGQHNHLENPNMDHRTVSLDTFFHET 63

  Fly    56 DDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVF 119
            ....::||.:.:||||.||:.:....|..|::.|.:...|.  .|.||:|.| :|.|.:|.|.|.
  Rat    64 STGKHVPRTLFMDLEPTVIDGVRVGKYHSLFHPEQLVNGKE--DAANNYARGRYSVGSEVIELVL 126

  Fly   120 DILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQ 184
            :.:.:.|.....|:||::..|..||||||..|.::||||..:.||....:||:|: ..||..||:
  Rat   127 ERIRKLAKQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKTKLEFSVYPS-PRISTAVVE 190

  Fly   185 PYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYM 249
            |||:|||.....:.:|...::||.|:..|...:|.::.|:::.||.|::.::|..|.:||:...:
  Rat   191 PYNAILTTHSTIEYSDCTFMVDNEAVYNICHRKLGVEHPSYSSINRLIAQVLSSITASLRFEGPL 255

  Fly   250 NNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQS 314
            |.:||....:|:|.|::||.:|...|::|  ..|......:|.|:.....:..|.:|        
  Rat   256 NVDLIEFQTNLVPYPRIHFPITTLAPIIS--AEKAYQEHLSVPDITASCFELSNQLV-------- 310

  Fly   315 RQC------FVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHK 373
             :|      :::...:.:|:|.|..|::::..::.|....|:.|.|...:|.:....|.|.....
  Rat   311 -KCDPRLGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINCQPPTVVPGGD 374

  Fly   374 VSGL-----MMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLV 433
            ::.:     |::|.|.|...:.|...::|.:..:.|||..:..|.|   :|.|.:.||:.:..|.
  Rat   375 LARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGM---ELGEFEEAREDLAALE 436

  Fly   434 QEYE 437
            ::||
  Rat   437 KDYE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 136/456 (30%)
Tubal3NP_001427053.1 None

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