DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and Tubd1

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001099296.1 Gene:Tubd1 / 287592 RGDID:1311967 Length:483 Species:Rattus norvegicus


Alignment Length:474 Identity:129/474 - (27%)
Similarity:203/474 - (42%) Gaps:126/474 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IITLQLGQCGNQIGFEFWKRL-----CLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRA 64
            |:|:||||||||||||.:..|     | ..|:......|.:....::|   ||.:.::...:.||
  Rat     3 IVTVQLGQCGNQIGFEVFDTLFRDSHC-SQGLCSKRENEAYQASCKER---FFREEENGVPVARA 63

  Fly    65 VLIDLEPRVINNIMTSPYSK---LYNQENVFLSKHGGGAGNNWASGFS-QGEKVQEEVFDILDRE 125
            ||||:||:|||..::.....   .|.|...|..|.  |:|||||.|:| .|.|.:|.:.:::..|
  Rat    64 VLIDMEPKVINQTLSKAAQSGRWKYGQHTSFCQKQ--GSGNNWAYGYSVHGPKHEESIMNLIQTE 126

  Fly   126 ADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSIL 190
            .:..|||.||.:..|:|||||||:|:::.::|.:::...|.....::|.  ...:|:||.|||||
  Rat   127 VEKCDSLSGFFIIMSMAGGTGSGLGAFITQKLQDQYSSSLKMNQIIWPY--GTGEVIVQNYNSIL 189

  Fly   191 TLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINN------------------------- 230
            ||..|.:.:|::::.:|..:::|..:|::|:..:|..:|.                         
  Rat   190 TLSHLYRSSDALLIHENDVVHKICAKRMNIKQISFRDLNRVLAHQLGSVFQPTHSEDSSFHYCRN 254

  Fly   231 -LVSTIM--SLSTTT-------LRYPSYMNNNLIG-LTASLIPTPQLHFLMTGYTPLMSDCETKT 284
             |||.|:  .|...|       .|.|.:::.|  | |...|:|.|:...|.....|.||      
  Rat   255 PLVSGIVGPGLPHATNVCLVALYRRPMFLSTN--GDLMEHLVPHPEFKMLGVRNIPQMS------ 311

  Fly   285 SVRKTTVLDVMRRLLQPKNMMVSALT----DKQSRQCFVSILNIIQG---EVDPSQVHKSLQRIR 342
                            .:::..|..|    .|..||..:|...:.:|   :|.|           
  Rat   312 ----------------AESLAYSTFTWAGLLKHLRQMLISRAKMEEGIDWQVRP----------- 349

  Fly   343 ERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFKRALAQYDKLRKR---NA 404
              .|:...|.|.|              ||||            ...|..:||....||.|   :|
  Rat   350 --PLSGLPPIGKA--------------SAHK------------EPHFNTSLANLVILRGREVHSA 386

  Fly   405 FLDNFRRESMFQDDLTELD 423
            .:..||..:::...|...|
  Rat   387 DVGGFRDAALYTSWLEPAD 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 129/474 (27%)
Tubd1NP_001099296.1 delta_zeta_tubulin-like 2..482 CDD:276958 129/474 (27%)

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