DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and gtb1

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_596147.1 Gene:gtb1 / 2540223 PomBaseID:SPBC32F12.04 Length:446 Species:Schizosaccharomyces pombe


Alignment Length:445 Identity:299/445 - (67%)
Similarity:364/445 - (81%) Gaps:3/445 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSEIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAV 65
            |..||||||.||||||||.:||::|||||||.|||.||.|||:|.|||||||||:||..|||||:
pombe     1 MGREIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIPRAI 65

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEEVFDILDREADGSD 130
            ||||||||:|||::..|..|||.||:.::|:|||||||||:|:|..|::.|::.|::||||||||
pombe    66 LIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANGYSHAERIFEDIMDMIDREADGSD 130

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            |||||.|.||||||||||:||::||||::|:|||:|||||||||...:||||||||||:|.||||
pombe   131 SLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRL 195

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            |..|||||||||.||..||.:|||.|.|||.|.|.||||:||.||||||||.||||:|:.:.|||
pombe   196 TLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASL 260

  Fly   261 IPTPQLHFLMTGYTPLMS-DCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNI 324
            ||:|:.|||:|.|||..: ..|...::|||||||||||||.|||.|||....|:|  ||:|||:|
pombe   261 IPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKS--CFISILDI 323

  Fly   325 IQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLF 389
            ||||.||:.|||||.|||||:.|:|||||||||||||.:.|||:::.|:|||||:||||.|:|||
pombe   324 IQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLF 388

  Fly   390 KRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDY 444
            ||.|.|||:||||||||:.:::|::|:|||.|.|.:||.|..|:.||||....:|
pombe   389 KRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYEACEDPNY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 299/445 (67%)
gamma_tubulin 4..436 CDD:276957 293/432 (68%)
gtb1NP_596147.1 PLN00222 1..444 CDD:215108 299/445 (67%)
gamma_tubulin 3..435 CDD:276957 293/433 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 329 1.000 Domainoid score I213
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H833
Inparanoid 1 1.050 630 1.000 Inparanoid score I140
OMA 1 1.010 - - QHG53966
OrthoFinder 1 1.000 - - FOG0002428
OrthoInspector 1 1.000 - - otm47237
orthoMCL 1 0.900 - - OOG6_101897
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1481
SonicParanoid 1 1.000 - - X1612
TreeFam 1 0.960 - -
1413.860

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