DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and mec-7

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_509313.1 Gene:mec-7 / 181036 WormBaseID:WBGene00003171 Length:441 Species:Caenorhabditis elegans


Alignment Length:462 Identity:164/462 - (35%)
Similarity:265/462 - (57%) Gaps:39/462 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQ---DRKDVFFYQADDNHYIPRAV 65
            ||:.:|.||||||||.:||:.:..||||.|.|   .:..|..   :|.:|::.:|..|.|:||||
 Worm     3 EIVHIQAGQCGNQIGSKFWEVISDEHGIDPSG---QYVGDSDLQLERINVYYNEAGSNKYVPRAV 64

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGS 129
            |:||||..::::.:.|:.:|:..:|....:  .|||||||.| :::|.::.:.|.|::.:||:.:
 Worm    65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQ--SGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127

  Fly   130 DSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKR 194
            |.|:||.|.||:.||||||||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:
 Worm   128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQ 191

  Fly   195 LTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTAS 259
            |.:..||...:||.||..|....|.:.|||:..:|:|||..||..||.||:|..:|.:|..|..:
 Worm   192 LVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVN 256

  Fly   260 LIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNI 324
            ::|.|:|||.|.|:.||.|  .:....|..||.::.::....|||| :|...:..|  :::...|
 Worm   257 MVPFPRLHFFMPGFAPLTS--RSNQQYRAITVPELTQQCFDAKNMM-AACDPRHGR--YLTAAAI 316

  Fly   325 IQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGI 385
            .:|.:...:|.:.:..|:.:..:.|:.|.|.:::.|:    ||..       |:|...:.|.|.|
 Worm   317 FRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGL-------KMSATFIGNSTAI 374

  Fly   386 SSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEY----EAATQIDYPQ 446
            ..||||...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||    |||...|   
 Worm   375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQQYQEAAADED--- 433

  Fly   447 WSPAVEA 453
               |.||
 Worm   434 ---AAEA 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 161/454 (35%)
gamma_tubulin 4..436 CDD:276957 155/439 (35%)
mec-7NP_509313.1 PLN00220 1..426 CDD:215107 157/443 (35%)
beta_tubulin 2..426 CDD:276956 157/443 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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