DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tbb-6

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_506075.2 Gene:tbb-6 / 179680 WormBaseID:WBGene00006539 Length:426 Species:Caenorhabditis elegans


Alignment Length:457 Identity:145/457 - (31%)
Similarity:239/457 - (52%) Gaps:64/457 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            |||.:|:||||||||.:||:.:..|||:..||..:.......:|...::.:.:...|:|||:|:|
 Worm     3 EIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSL 132
            |:|..||.:.::.|.||::.||....:  .||||||:.| :.||.::.::|..::.|||:.:|||
 Worm    68 LDPESINYVRSTQYGKLFDPENAVSGE--SGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSL 130

  Fly   133 EGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTK 197
            |||.|.||:.||||||:||.::.:|.|.:..|.:.|.|:.|:. ::||.||:|||:||::..|..
 Worm   131 EGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSA-KVSDTVVEPYNAILSMPHLMD 194

  Fly   198 CADSVVVLDNTALNRIATERLHIQT-PTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLI 261
            ..|....:||.|:..|....|.::. .|:..:|:|.|..:|..||..|:...:..::..|..:  
 Worm   195 NCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKLNTA-- 257

  Fly   262 PTPQLHFLMTGYTPL----MSDCETKTSVRKTTVLDVMRRLLQPKNMMV----------SAL--- 309
            .:|:|||.||.:.|:    :.||:.      .::.|:.:::|..||:|.          ||:   
 Worm   258 GSPRLHFFMTSFAPVYGKGIIDCQA------FSISDLTQQVLDAKNIMTCNHNQGKFLSSAIIYR 316

  Fly   310 ---TDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSA 371
               |:|:..:..:|:.|     .|||::.:||.:.....:.: ||                 ...
 Worm   317 GQQTEKKDAEQIISVEN-----EDPSEMIESLPKSTNTDVCD-IP-----------------SRG 358

  Fly   372 HKVSGLMMANHTGISSLFKRALAQYDKLRKRNAFLDNF-RRESMFQDDLTELDIARDTVDCLVQE 435
            .|.|...:||.|.|....||...|:..|.:|.|||..: ..||.|.|       |.:.|:.|:.|
 Worm   359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYTMEESEFTD-------AENKVNDLISE 416

  Fly   436 YE 437
            ::
 Worm   417 FQ 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 144/454 (32%)
tbb-6NP_506075.2 beta_tubulin 2..421 CDD:276956 145/457 (32%)

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