DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tbb-1

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_499367.1 Gene:tbb-1 / 176501 WormBaseID:WBGene00006536 Length:449 Species:Caenorhabditis elegans


Alignment Length:447 Identity:153/447 - (34%)
Similarity:264/447 - (59%) Gaps:20/447 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLID 68
            ||:.:|.||||||||.:||:.:..||||.|||..:..:....:|.||::.:|::..|:|||||:|
 Worm     3 EIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVD 67

  Fly    69 LEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSL 132
            |||..::::.:.|:.:|:..:|....:  .|||||||.| :::|.::.:.|.|::.:||:|.|.|
 Worm    68 LEPGTMDSVRSGPFGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCL 130

  Fly   133 EGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTK 197
            :||.|.||:.||||||||:.::.::.|.||.:::.::||.|: .::||.||:|||:.|::.:|.:
 Worm   131 QGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPS-PKVSDTVVEPYNATLSVHQLVE 194

  Fly   198 CADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIP 262
            ..|....:||.||..|....|.:..||:..:|:|||..||..||.||:|..:|.:|..|..:::|
 Worm   195 NTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP 259

  Fly   263 TPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQG 327
            .|:|||.|.|:.||  ..:...:.|..||.::.:::...|||| :|...:..|  ::::..:.:|
 Worm   260 FPRLHFFMPGFAPL--SAKGAQAYRALTVAELTQQMFDAKNMM-AACDPRHGR--YLTVAAMFRG 319

  Fly   328 EVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGISSL 388
            .:...:|.:.:..::.:..:.|:.|.|.:::.|:    ||..       |::...:.|.|.|..|
 Worm   320 RMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGL-------KMAATFVGNSTAIQEL 377

  Fly   389 FKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDYP 445
            |||...|:..:.:|.|||..:..|.|.:.:.||.:...:.:....|:|:.||..|.|
 Worm   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDEP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 148/436 (34%)
tbb-1NP_499367.1 PLN00220 1..447 CDD:215107 153/447 (34%)

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