DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tbg-1

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:447 Identity:206/447 - (46%)
Similarity:291/447 - (65%) Gaps:21/447 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IITLQLGQCGNQIGFEFWKRLCLEHGISPDG--VLEDFATDGQDRKDVFFYQADDNHYIPRAVLI 67
            ::|:.:||||||:...|||.:..||||:..|  ..||   |..|:||:.||||||:||:|||||:
 Worm     7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHED---DMNDKKDLLFYQADDDHYVPRAVLV 68

  Fly    68 DLEPRVINNIMTSP-YSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEEVFDILDREADGSDS 131
            ||||||||.:|.|| :|.|:|.:|:|:|.||||||||||||:.||::|||::.||:.|||:.:::
 Worm    69 DLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQGQEVQEKIMDIIIREAENTNN 133

  Fly   132 LEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLT 196
            |:|.:..||::||||||.||.:||||.|.||||:|||||||.|.|..:||||.|||.:|:::||.
 Worm   134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLI 198

  Fly   197 KCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLI 261
            :..|.||||||.||:|:|..:....||||..||:||:.|||.||...|:.|.|..::..|  .|.
 Worm   199 ENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLA 261

  Fly   262 PTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQ 326
            |.|.:||:.:..:|::...|..|  |||:|.||.|.||:|.:||||..:..:...|.:|....:|
 Worm   262 PFPPMHFIQSAISPVVDPNENFT--RKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQ 324

  Fly   327 GEVDPSQVHKSLQR----IRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISS 387
            |:::...:..:.|.    ||........|     :::.....||||:..:|||||::.|.|.::.
 Worm   325 GQIEAHTIMTAEQNVDFAIRRPPFYMLKP-----LRMMHAPLSPYVRPQYKVSGLLLNNSTSVAP 384

  Fly   388 LFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDY 444
            ||:..|::|||||.:.||:|.|.:...|..|:  :|.|...|..|:.||:|..|.||
 Worm   385 LFESLLSKYDKLRSKRAFIDKFEKIDNFSLDM--MDDAMHIVQDLLDEYKAVVQKDY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 206/447 (46%)
gamma_tubulin 4..436 CDD:276957 200/437 (46%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 200/437 (46%)
PLN00222 7..443 CDD:215108 206/447 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166836
Domainoid 1 1.000 257 1.000 Domainoid score I1084
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 379 1.000 Inparanoid score I1198
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53966
OrthoDB 1 1.010 - - D267298at33208
OrthoFinder 1 1.000 - - FOG0002428
OrthoInspector 1 1.000 - - otm14684
orthoMCL 1 0.900 - - OOG6_101897
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1481
SonicParanoid 1 1.000 - - X1612
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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