DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tba-6

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_492419.2 Gene:tba-6 / 172717 WormBaseID:WBGene00006532 Length:464 Species:Caenorhabditis elegans


Alignment Length:450 Identity:134/450 - (29%)
Similarity:238/450 - (52%) Gaps:19/450 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDG--VLEDFATDGQDRKDVFFYQADDNHYIPRAVL 66
            |:|::.:||.|.|||...|:..||||||.|||  |.:|...:..:..:.||.:.....::||.:.
 Worm     9 EVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLF 73

  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130
            :||||.|::.:.|..|..|::.|.:...|.  .|.|.:|.| ::.|.::.:.|.|.:.|.|:..:
 Worm    74 VDLEPTVVDEVRTGTYRSLFHPEQLLSGKE--DAANCYARGRYTIGREMIDVVMDRVKRLAENCN 136

  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195
            .|:|||:.||..||||||..|.::||||..:.||....::::| ..::|..:|:||||||.....
 Worm   137 GLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYP-APQVSTSMVEPYNSILMTHTT 200

  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260
            .:.:|...::||.|:..|....|.:..||:|.:|.||:.|:|..|.:||:...:|.:|.....:|
 Worm   201 LEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNL 265

  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325
            :|.|::||.:..|.||:|  ..:.|..:.||.|:.....:|...||..   ...|..::::..:.
 Worm   266 VPYPRIHFPLVTYAPLVS--AERASHEQNTVSDMTHACFEPGYQMVKC---DPRRGKYMAVCLLY 325

  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKV-----SGLMMANHTGI 385
            :|:|.|..::.::..::.::...|:.|.|...:|.:....|.|.....:     |..|::|.|.|
 Worm   326 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAI 390

  Fly   386 SSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDYP 445
            :..:.|...::|.:..:.||:..:..|.|.:.:.:|   ||:.:..|.::||...:.:.|
 Worm   391 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDMAALEKDYEEIGEDELP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 131/439 (30%)
tba-6NP_492419.2 alpha_tubulin 8..441 CDD:276955 133/442 (30%)

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