DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUBB3

DIOPT Version :9

Sequence 1:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_006077.2 Gene:TUBB3 / 10381 HGNCID:20772 Length:450 Species:Homo sapiens


Alignment Length:442 Identity:151/442 - (34%)
Similarity:257/442 - (58%) Gaps:29/442 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQ---DRKDVFFYQADDNHYIPRAV 65
            ||:.:|.||||||||.:||:.:..||||.|.|   ::..|..   :|..|::.:|..:.|:|||:
Human     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPSG---NYVGDSDLQLERISVYYNEASSHKYVPRAI 64

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGS 129
            |:||||..::::.:..:..|:..:|....:  .|||||||.| :::|.::.:.|.|::.:|.:..
Human    65 LVDLEPGTMDSVRSGAFGHLFRPDNFIFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKECENC 127

  Fly   130 DSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKR 194
            |.|:||.|.||:.||||||||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:
Human   128 DCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSIHQ 191

  Fly   195 LTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTAS 259
            |.:..|....:||.||..|....|.:.|||:..:|:|||..||..||:||:|..:|.:|..|..:
Human   192 LVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVN 256

  Fly   260 LIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNI 324
            ::|.|:|||.|.|:.||.:  ......|..||.::.:::...|||| :|...:..|  ::::..:
Human   257 MVPFPRLHFFMPGFAPLTA--RGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGR--YLTVATV 316

  Fly   325 IQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGI 385
            .:|.:...:|.:.:..|:.:..:.|:.|.|.:::||:    ||..       |:|...:.|.|.|
Human   317 FRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGL-------KMSSTFIGNSTAI 374

  Fly   386 SSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437
            ..||||...|:..:.:|.|||..:..|.|.:.:.||   |...::.||.||:
Human   375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 151/442 (34%)
gamma_tubulin 4..436 CDD:276957 149/439 (34%)
TUBB3NP_006077.2 PLN00220 1..447 CDD:215107 151/442 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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