DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and tubz1

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_002941372.1 Gene:tubz1 / 100492972 XenbaseID:XB-GENE-5900222 Length:422 Species:Xenopus tropicalis


Alignment Length:481 Identity:120/481 - (24%)
Similarity:202/481 - (41%) Gaps:116/481 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLIDL 69
            :|.||:||||||||.|:|..||  :..|.......|:.||                :..|:.:|.
 Frog     3 LIWLQVGQCGNQIGQEWWHLLC--NNASDTDRYPYFSRDG----------------MINAICVDS 49

  Fly    70 EPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASGFSQGEKVQEE------VFDILDREADG 128
            ||:||..:............|:.:.:.  |.|||||.|:| |:....|      ..:....|.:.
 Frog    50 EPKVIRKLWKRVKKGSLRDSNLIVGRK--GRGNNWAFGYS-GDGTDTEKSLLARTMESFRHELER 111

  Fly   129 SDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLK 193
            .|...|.||.||:.||||||:|:.:.|.:.:.:|...|.:.:|.|:  |..|..:|.|||:|.|.
 Frog   112 RDCYSGTVLLHSLCGGTGSGLGARLCEEIRDTYPAGHILSVAVAPH--ETGDTPLQHYNSLLCLS 174

  Fly   194 RLTKCADSVVVLDN-TALNRIAT--ER-----LHIQTP-TFTQINNLVSTIMS---LSTTTLRYP 246
            .|.:.:|.:::..| ..::|:|.  |:     ..::.| :...:|:.:::.::   ..|.|||..
 Frog   175 WLQRYSDGILLFQNDDIMHRVAALGEKKVPLVSGVEAPVSIAAMNSHIASCLAGLLYPTNTLRTR 239

  Fly   247 SYMNNNLIG-----LTASLIPTPQLHFLMTGY-----TPL-------MSDCETKTS----VRKTT 290
            |.::   :|     :..:|.|...|.||.|..     ||.       ::....:||    :..:|
 Frog   240 SAVS---VGIEPWEIIRTLCPMTTLKFLHTAQICRRGTPFWDRVTLSLTKNIPRTSPDGRLHHST 301

  Fly   291 VLDVMRRLLQPKNMMVS----ALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIP 351
            .|..:.|..|.|..::|    .:..|||.:|                                :|
 Frog   302 SLLAVSRASQDKPFLLSQDSVLMKLKQSYRC--------------------------------VP 334

  Fly   352 WGPASI------QVALPRSSPYVQSAHKVSGLMMANHTGISSLFKRALAQYDKLRKRNAFLDNFR 410
            |.|..|      |..|..|    |.:|.::  :.|||:..:.|..|.:.:...:.:..|:|..::
 Frog   335 WNPFPIDYWTGSQNILDPS----QQSHSLT--VCANHSSAADLMSRVIQRAQSMYEARAYLHWYQ 393

  Fly   411 RESMFQDDLTELDIARDTVDCLVQEY 436
            |....::|...   |..|:..:|:||
 Frog   394 RYGCEEEDFQG---AFHTLHSVVEEY 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 118/479 (25%)
tubz1XP_002941372.1 delta_zeta_tubulin-like 2..417 CDD:276958 120/481 (25%)

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