DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and CG18764

DIOPT Version :9

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster


Alignment Length:486 Identity:106/486 - (21%)
Similarity:182/486 - (37%) Gaps:119/486 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CRLCAKDDAHGNV---KVQMN----ENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTL 68
            ||.|      |::   |:..|    ||.:      ::..|.......:..:.||.|.:|..|...
  Fly     5 CRTC------GSIIYNKMPKNLFHIENEK------MLQDINLVTGTTLHNDPELPSSICACCTLD 57

  Fly    69 ISELIDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNV 133
            :::.|.|.|.....|......||:....:...||.                       ||.|   
  Fly    58 LNQAILFRERCILTQKQLVHRRRSPEAKEPAEDVE-----------------------EMAS--- 96

  Fly   134 YQKPAELLKDFPLAETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNTSQLDM 198
               |.:.|.| |..|.....:|     :...::....:...::.:..:||    .:|...:..||
  Fly    97 ---PPDCLND-PFGEVDEYIVE-----SPEEVLDHDSDAHHDLDEDNYID----SVEDVDALQDM 148

  Fly   199 EDVLDELPQEELSQPRLDSTTSPASMENDVKSEMLDSCEGD-DDFL-PVDG----QLMDLVAVAT 257
            .:|.:|..|:      ::|..|  |::.:::|...|....| :|:: |.:|    :.::...|::
  Fly   149 AEVAEEDSQD------VESLIS--SVQKELESICNDDSNSDNNDYMEPQNGSYFNETINEYEVSS 205

  Fly   258 TPNTLESTAEEKAKRGRMDCEKCGKVYRNR-------ASYEKHLERECRRIERRVKVDKTTTTCD 315
            .|||  ...|.|:..||.......|..|.:       .:.|:.:||  :|::|     |....|:
  Fly   206 NPNT--PLPESKSAAGRSTKPATTKPKRKKQYVTWKNMTEEQIIER--KRLQR-----KRECVCE 261

  Fly   316 ICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEH-KLVHTESRPFECTVCKAGFK 379
            .|.:..:..:..|||... |...|.:.|..|||:..|...:..| :::|...:|::|..|...|.
  Fly   262 QCGRQFTDQSNFKLHMLR-HTGNKNFACQQCGKRFYTDHLMTLHQRIIHQGEKPYDCRFCTKSFH 325

  Fly   380 N-RARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHL 443
            | ..||                            :|:..||..:...|..|...||.:...|.|.
  Fly   326 NSNTRL----------------------------IHERTHTNAKPYSCHHCDKCFKSASGRKRHE 362

  Fly   444 LSHTGLRPYVCNYCGKSFACNANCRSHKLKK 474
            |.|||:|.:.|..|.:||..|.:.::|...|
  Fly   363 LIHTGVRAFACTICKQSFQRNTHLKAHLRSK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 18/82 (22%)
COG5048 <313..471 CDD:227381 40/159 (25%)
C2H2 Zn finger 314..335 CDD:275368 5/20 (25%)
C2H2 Zn finger 343..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 371..391 CDD:275368 6/20 (30%)
C2H2 Zn finger 398..418 CDD:275368 1/19 (5%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
zf-H2C2_2 439..463 CDD:290200 11/23 (48%)
C2H2 Zn finger 454..475 CDD:275368 7/21 (33%)
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 18/81 (22%)
C2H2 Zn finger 260..280 CDD:275368 5/20 (25%)
zf-H2C2_2 272..297 CDD:290200 9/25 (36%)
C2H2 Zn finger 288..309 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..337 CDD:275368 7/47 (15%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..391 CDD:275368 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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