DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and idc

DIOPT Version :10

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster


Alignment Length:556 Identity:126/556 - (22%)
Similarity:198/556 - (35%) Gaps:162/556 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TDGSHWLNWCRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECY 66
            |....|: .||:|.:........: .|::|:.:    |...||:...|.::..|.....:|.:|:
  Fly    15 TSTQKWI-VCRVCLQQPKEPMASI-FNDDSEKD----LTHMIRECGGVPIKQFDHYPDKICEKCF 73

  Fly    67 TLISELIDFAE-------HVTKVQDIFEVLRR------TETDGDQEMDVAALRQQFGLCDDDWTH 118
            .::.....|.|       |:.:.....||.:|      :||....|.||                
  Fly    74 KVLKMAFKFRETCQRSYGHLRQFVGPVEVEQRPPEKKGSETATKLEPDV---------------- 122

  Fly   119 IIKPIPALEMESDNVYQKPA--ELLKDFPLAETSSQEMEISKRTT--TTHLIQTKKNVEMEIPKQ 179
                      :.|...|:|.  |..:|..|.|:...|.:.:..|.  ..| .:.:..:.:|:.|.
  Fly   123 ----------DPDEAEQEPEHDEEDEDVDLDESHYAEADDAAETQGGVFH-DEIEDGILVELEKD 176

  Fly   180 EFIDLGPILLEKNTSQLDMEDVLDE------------LPQEELSQPRLDSTTSPASMENDVKSEM 232
            ..:.:      || .|::.:.:::|            :|.:.......|...|..|.|    .|.
  Fly   177 RIVHV------KN-EQVEEDGIIEEVYDVYETYEGDLIPDQGYDHEMADQALSELSAE----IEY 230

  Fly   233 LDSCEGD-------DDFLPVDGQLMDLVAVATTPNTLESTAEE----KAKRGRMDCEKCGKVYRN 286
            ||..|.|       :|...||               |.||.||    |:.|..:......|    
  Fly   231 LDQVEHDQLTESAHEDDAEVD---------------LNSTEEEFVPSKSVRASIHARNATK---- 276

  Fly   287 RASYEKHLERECRRIERR--------VKVDKTTT-TCDICN---------KTLSSATALKLHKE- 332
                        ||:..|        |.|:.:|: |.|..|         .:..|..::|..|: 
  Fly   277 ------------RRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDI 329

  Fly   333 -------GIHQNVK---------------PYICDSCGKQLKTITALNEHKLVHTESRPFECTVCK 375
                   ..|..:|               .||||.||....:.:.|.||..||:..:|.||.:|.
  Fly   330 SIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICG 394

  Fly   376 AGFKNRARLKAHYQIH-AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTL 439
            ..|....:|..|...| ....:.|:.|........|.|.|..:||.||..:||||...|..:.||
  Fly   395 HCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTL 459

  Fly   440 KTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKH 475
            |.|.:.|||.:|:||:.|||.|.     :::||:.|
  Fly   460 KFHKMIHTGEKPHVCDVCGKGFP-----QAYKLRNH 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 15/83 (18%)
COG5048 <313..471 CDD:227381 55/190 (29%)
C2H2 Zn finger 314..335 CDD:275368 5/37 (14%)
C2H2 Zn finger 343..363 CDD:275368 7/19 (37%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
C2H2 Zn finger 398..418 CDD:275368 5/19 (26%)
C2H2 Zn finger 426..446 CDD:275368 9/19 (47%)
C2H2 Zn finger 454..475 CDD:275368 7/20 (35%)
idcNP_650862.1 zf-AD 22..95 CDD:214871 15/77 (19%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
COG5048 386..>447 CDD:227381 17/60 (28%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
SFP1 <424..491 CDD:227516 29/72 (40%)
C2H2 Zn finger 446..466 CDD:275368 9/19 (47%)
C2H2 Zn finger 474..494 CDD:275368 8/22 (36%)

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