DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and CG17802

DIOPT Version :9

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster


Alignment Length:477 Identity:108/477 - (22%)
Similarity:182/477 - (38%) Gaps:105/477 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CRLCAKDDAHGNVKVQMN------ENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLI 69
            ||||      |::....|      |||:      ::..|.....:.:....::...:|:.|...:
  Fly     5 CRLC------GDLIYTQNPVNIFDENSK------MVRQIALVTGLWLTDHSKMPRNMCSCCLLSL 57

  Fly    70 SELIDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDW------THIIKPIPALEM 128
            ...|.|.:...|..:...:.||:....|               |..|      .|....|...|:
  Fly    58 KSAIAFRQACIKTNNRLTIQRRSVEAKD---------------DGCWADPLSDAHEGLKINDAEV 107

  Fly   129 ESDNVYQ----KPAELLKDFPLAETSSQEMEISKRTTTTHLIQTKKNVEMEIP----------KQ 179
            |.:.:|:    ....|.:|..|.:...:|.|:::.       :..:::..|||          :|
  Fly   108 EQEVLYEVSYADNEGLEEDHDLYKKEEEESEVNEN-------KEFEDIACEIPFSKEDDEQEQQQ 165

  Fly   180 EFIDLGPILLEKNTSQLDME---DVLDELPQEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDD 241
            |:.|    :::|.|...|.|   :..:..|.||.||.  :......|.|:|  .|:..:.:||.|
  Fly   166 EYED----MVDKKTGHDDGEESQECEESQPDEEESQQ--NEEDEEESQEDD--DELWQNEDGDSD 222

  Fly   242 FLPVDGQLMDLVAVATTPNTLESTAEEKAKRGRMDCEKCGKVYRNRAS-------YEKHLERECR 299
               .|...|..:...:..:.|:   |:|..|         :.|..|:|       :.|..::   
  Fly   223 ---TDADSMSDIEATSRQSALD---EDKKPR---------RKYTKRSSPKNDDTDFLKPAKK--- 269

  Fly   300 RIERRVKVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEH-KLVH 363
              :|:..:.:....||.|.|..:......||... |..|||:.|..||::......||.| ::.|
  Fly   270 --KRKTYISQKVHICDHCGKKFTDKGNFNLHVLR-HSGVKPFECPECGQKEFNRYILNIHIRVKH 331

  Fly   364 TESRPFECTVCKAGF-----KNRARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERR 423
            ...:|:.|..|...|     ::|...:.|.......:|.||.|.|:.::......|:||||.||.
  Fly   332 RGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVHTGERN 396

  Fly   424 LKCDVCGALFKRSKTLKTHLLS 445
            ..|:||...|.|:..||||..|
  Fly   397 FHCEVCKVSFTRNSNLKTHYRS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 15/81 (19%)
COG5048 <313..471 CDD:227381 45/139 (32%)
C2H2 Zn finger 314..335 CDD:275368 6/20 (30%)
C2H2 Zn finger 343..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 371..391 CDD:275368 5/24 (21%)
C2H2 Zn finger 398..418 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 10/20 (50%)
zf-H2C2_2 439..463 CDD:290200 5/7 (71%)
C2H2 Zn finger 454..475 CDD:275368
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 15/80 (19%)
C2H2 Zn finger 282..302 CDD:275368 6/20 (30%)
C2H2 Zn finger 310..331 CDD:275368 6/20 (30%)
C2H2 Zn finger 339..360 CDD:275368 4/20 (20%)
C2H2 Zn finger 371..388 CDD:275370 4/16 (25%)
zf-met 398..421 CDD:289631 10/21 (48%)
C2H2 Zn finger 399..417 CDD:275368 9/17 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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