DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and CG6254

DIOPT Version :10

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster


Alignment Length:602 Identity:205/602 - (34%)
Similarity:306/602 - (50%) Gaps:118/602 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGSHWLNWCRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYT 67
            |.:.|..|||||:|:.. .|..|...|..|.:|.:.:.|.|.|||.|.::.|||||:.||:||:|
  Fly    14 DSTIWHQWCRLCSKEHP-TNQNVFFREAKQNSWASTMAMTIGKYFWVDIKREDELSNFLCSECFT 77

  Fly    68 LISELIDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHII-----KPIPALE 127
            |:..||:|:|.|.|||.:|..|:..::  :..||...:|:..|:..|.|.||:     :.:|   
  Fly    78 LMDCLIEFSERVRKVQILFSKLQLLQS--NNLMDYEKIREDCGVATDGWKHIMLGAVDESLP--- 137

  Fly   128 MESDNVY---QKP------------AELL---------------KDFPLAE-TSSQEMEISKRTT 161
             ::|.|:   ::|            :|:|               :|||..| ...:||:||  ..
  Fly   138 -QNDEVFISEEQPIVCQTETSSKMKSEILMIPNFLVEKQCLQEKQDFPKEEDVIEEEMQIS--GV 199

  Fly   162 TTHLIQTKKNVEMEIPKQEF------IDLGPILLEKNTSQLDMEDVLDELPQ--EELSQPRL--D 216
            ...:::  ::||.::.::|.      ||.....:|....:|:.:|..|.|.:  |.:::.|.  :
  Fly   200 EEEILE--EDVEEDLAEEEVETVEEEIDTVGEEVEAVEEELETQDATDCLVEEVEHMTEDRYIEE 262

  Fly   217 STTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLES------TAEEKAKRGRM 275
            |.....|..:|...|..:..:.:....||:           |.:|:||      |.|:.::....
  Fly   263 SQIIEESQVSDFNMETYEIVQHNPQKEPVE-----------TKDTVESIESNEDTQEDISREHVT 316

  Fly   276 D-------------CEKCGKVYRNRASYEKHLER------------EC----------------R 299
            |             |..|.|.|:...:|::|:|.            ||                .
  Fly   317 DEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVHNTVADDLPQLECNQCKLCFPTVAQLHAHH 381

  Fly   300 RIERRVKVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHT 364
            |...|.| .||...|..|.|..:::..||.|.||||..:|||:||.|||....||.|.:||||||
  Fly   382 RTHVRAK-PKTDNCCPHCEKRFTTSGTLKRHIEGIHNQIKPYVCDLCGKSFNYITGLKDHKLVHT 445

  Fly   365 ESRPFECTVCKAGFKNRARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVC 429
            :..||||.|||.||||.||||.|...|:...:.|.:||.||:||||:|.||:||::.|:.||:||
  Fly   446 DECPFECPVCKRGFKNNARLKIHLDTHSAEIYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVC 510

  Fly   430 GALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKHPQEVQQEDGARLPSRLNVP 494
            |:.||||||||.||:.|||:|||.||:||:.||..:||||||.:.||:|:.:|:...:.....:|
  Fly   511 GSAFKRSKTLKAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAHPKELAEEEARGVTRSTLLP 575

  Fly   495 TLDELRVMTQ--KLPKG 509
            .||||.:.::  |.|.|
  Fly   576 MLDELTIASKLLKTPAG 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 36/76 (47%)
COG5048 <313..471 CDD:227381 90/157 (57%)
C2H2 Zn finger 314..335 CDD:275368 8/20 (40%)
C2H2 Zn finger 343..363 CDD:275368 11/19 (58%)
C2H2 Zn finger 371..391 CDD:275368 13/19 (68%)
C2H2 Zn finger 398..418 CDD:275368 12/19 (63%)
C2H2 Zn finger 426..446 CDD:275368 14/19 (74%)
C2H2 Zn finger 454..475 CDD:275368 12/20 (60%)
CG6254NP_649983.2 zf-AD 21..99 CDD:462262 37/78 (47%)
COG5048 <353..554 CDD:227381 99/201 (49%)
C2H2 Zn finger 364..384 CDD:275368 2/19 (11%)
C2H2 Zn finger 395..416 CDD:275368 8/20 (40%)
C2H2 Zn finger 424..444 CDD:275368 11/19 (58%)
C2H2 Zn finger 452..472 CDD:275368 13/19 (68%)
C2H2 Zn finger 479..499 CDD:275368 12/19 (63%)
C2H2 Zn finger 507..527 CDD:275368 14/19 (74%)
C2H2 Zn finger 535..553 CDD:275368 11/17 (65%)

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