DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and nom

DIOPT Version :9

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:298 Identity:80/298 - (26%)
Similarity:115/298 - (38%) Gaps:61/298 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 QLDMEDVLDELPQEELSQ----PRLDSTTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAV 255
            |.|::..:....|..|.|    |.|.|....||.|..|:              |.|         
  Fly    56 QTDLQSAMIFRRQCILQQKKWVPLLQSDKVGASEEKKVE--------------PND--------- 97

  Fly   256 ATTPNTLESTAEEKAKRGRMDCEKCGKVYRNRASYEKHLERECRRIERRVKVDKTTTTCDICNKT 320
               |:|.:.|.:.:..|.||..|....|..|.:.         ......|..|:.....:|.|:.
  Fly    98 ---PSTKKKTTKRRRGRPRMPLEIVDIVVTNESK---------ASAGESVGGDEFDQPVEISNEP 150

  Fly   321 LSSATALKLHK---------EGIHQ--NVKPYICDSCGKQLKTITALNEHKLVHTESRPFECTVC 374
            .::.:.:.|.:         |..|.  ||:.:.||:||......::|..|:..|...||:.|..|
  Fly   151 DATDSDVNLEEIDLPDEDGLESDHDLPNVQIHKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKEC 215

  Fly   375 KAGFKNRARLKAHYQIH--AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSK 437
            ...|...:.||||...|  .||.|.|..|.::..:......|:.|||.||...||.||..|.|:.
  Fly   216 PKTFLVASELKAHNLTHHTLEPPFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTC 280

  Fly   438 TLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKH 475
            .||.|:..|..:|.|.|:.|.:||:         ||||
  Fly   281 ILKAHMAVHQVVRKYSCDVCDRSFS---------LKKH 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 51/170 (30%)
C2H2 Zn finger 314..335 CDD:275368 4/29 (14%)
C2H2 Zn finger 343..363 CDD:275368 6/19 (32%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
C2H2 Zn finger 398..418 CDD:275368 3/19 (16%)
C2H2 Zn finger 426..446 CDD:275368 9/19 (47%)
zf-H2C2_2 439..463 CDD:290200 10/23 (43%)
C2H2 Zn finger 454..475 CDD:275368 6/20 (30%)
nomNP_001262384.1 zf-AD 5..76 CDD:214871 5/19 (26%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..261 CDD:275368 14/48 (29%)
zf-H2C2_2 255..278 CDD:290200 11/22 (50%)
C2H2 Zn finger 269..289 CDD:275368 9/19 (47%)
zf-H2C2_2 282..305 CDD:290200 9/22 (41%)
C2H2 Zn finger 297..313 CDD:275368 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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