DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and CG4707

DIOPT Version :10

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster


Alignment Length:695 Identity:140/695 - (20%)
Similarity:232/695 - (33%) Gaps:239/695 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLISELIDF 75
            |.||. |.::....:|..|..:.|    :...|.|:|.....|.....:.:|.||:..:|...:|
  Fly     4 CVLCL-DSSNAGYGLQSEEGVRLN----IRATIHKHFAFSEVLTAGGDAEVCRECWNCVSSFEEF 63

  Fly    76 AEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMES-DNVYQKPAE 139
            .:.|:.:.      |:..:|...|        ....|......||.|:.::|::: ...:..|:|
  Fly    64 HQRVSCLH------RQRSSDSKSE--------PIEFCGQTEEAIINPLYSVELDALAEAFFAPSE 114

  Fly   140 L------LKDFPLAETSSQEMEISKRTTTTHL-------IQTKKNVEMEIPKQ--------EFID 183
            :      |:..|..|.....::...||....|       ..:|:.::.|:|..        :|::
  Fly   115 VKVEVNELEPLPKVELLEDPVKTEIRTAPKRLGVPNEGSPHSKRRIKNELPVDSDSDAPLADFLN 179

  Fly   184 -------LGPILLEKNT-----------------------------SQLDMED------------ 200
                   :||   .||:                             .:||.||            
  Fly   180 SDSKRSSVGP---AKNSEANKGRQLRRSARRGRPPKAKPESAPSPKKELDSEDGEENARDNNDME 241

  Fly   201 ------VL--------------------------------------------------------- 202
                  ||                                                         
  Fly   242 FVAPEAVLGTDDSSSSSSESSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRL 306

  Fly   203 --DELPQEELSQPRLDS------TTSPASMEN-----------------DVKSEMLDSC------ 236
              :|:.:.:|.|...|.      ...|.|:.|                 :::|..::.|      
  Fly   307 SREEIERRKLQQDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFHL 371

  Fly   237 -----------EGDDDFLP-------VDGQLMDL-VAVATTPNTLESTAEEKAKRGRMDCEKCGK 282
                       :..|.|:.       .|.:.::: ....|.|   |..||.|.|| ...||||.|
  Fly   372 RKALAEHVLVHKNPDHFMCSQCGRVFQDSRALEVHEQTHTNP---EVKAEPKEKR-IYQCEKCPK 432

  Fly   283 VYRNRASYEKHLERECRRIERRVKVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCG 347
            .:..:|:.|.|      .:.:.|...:...:|..|||.:.:...||.|...:|......|||.||
  Fly   433 SFTTKAAMEYH------DVSKHVPKSEFKYSCPECNKKIPTERKLKEHLRYMHDPEAAIICDKCG 491

  Fly   348 KQLKTITALNE-HKLVHTES-----RPFECTVCKAGFKNRARLKAHYQ-IHAEP--SFVCNICGK 403
            |.|::.|.|.: |:|.|:|.     .|.:|.:|....::.:.||.|.: :|..|  ...|:||.|
  Fly   492 KTLRSQTNLKKHHELEHSEKPRPKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPGDEHRCHICNK 556

  Fly   404 KLQTRRTWNMHKVVHTE--ERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNAN 466
            .....|....| :.|..  ||:.||.:|...|||.:.|:.|..:|||...|.|..|..:|..|||
  Fly   557 TSTNSRALKRH-IYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNAN 620

  Fly   467 CRSHKLKKHPQEVQQEDGARLPSRLNVPTLDELRVMTQKLPKGTT 511
            ...|:.:.|..|.:.:....||..:            .|:.:|.|
  Fly   621 MYKHRQRLHRAEWEADRKKPLPPNI------------MKISQGAT 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 17/75 (23%)
COG5048 <313..471 CDD:227381 56/168 (33%)
C2H2 Zn finger 314..335 CDD:275368 7/20 (35%)
C2H2 Zn finger 343..363 CDD:275368 10/20 (50%)
C2H2 Zn finger 371..391 CDD:275368 5/20 (25%)
C2H2 Zn finger 398..418 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
C2H2 Zn finger 454..475 CDD:275368 7/20 (35%)
CG4707NP_611944.1 zf-AD 3..77 CDD:462262 18/83 (22%)
C2H2 Zn finger 334..355 CDD:275368 2/20 (10%)
LIM <361..407 CDD:413332 4/45 (9%)
C2H2 Zn finger 365..382 CDD:275368 1/16 (6%)
C2H2 Zn finger 390..410 CDD:275368 1/19 (5%)
C2H2 Zn finger 427..443 CDD:275368 7/15 (47%)
COG5236 <455..>574 CDD:227561 36/119 (30%)
C2H2 Zn finger 458..476 CDD:275368 7/17 (41%)
C2H2 Zn finger 487..507 CDD:275368 9/19 (47%)
C2H2 Zn finger 521..540 CDD:275368 5/18 (28%)
C2H2 Zn finger 551..572 CDD:275368 7/21 (33%)
C2H2 Zn finger 580..600 CDD:275368 7/19 (37%)
C2H2 Zn finger 608..629 CDD:275368 7/20 (35%)

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