DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and CG3407

DIOPT Version :10

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:603 Identity:128/603 - (21%)
Similarity:220/603 - (36%) Gaps:170/603 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 AHGNV-----------KVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLISEL 72
            ||.|.           |.:::...:||.|..|   ..::..||......|.|  |..|...:...
  Fly   119 AHNNASCTNARKVLPHKKRISRKLKGNIDPEL---DHQHKHVQDVAPSSLYS--CEICGYAVHTQ 178

  Fly    73 IDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIK-PIPALEMES-DNVYQ 135
            :||..|:                 .|..:...|.|:..:.|....|..| |:....:.: |.:.|
  Fly   179 LDFFAHL-----------------KQHYEPTVLEQRLVVQDPQQQHQQKEPLDMCGLSAQDKLQQ 226

  Fly   136 KPAELLKDFPLAETSSQEMEISKRT--TTTHLIQTKKNVEME----------------------- 175
            :.|:|.:.|       |:::::...  ..:|.:....||.:.                       
  Fly   227 EQAKLDQVF-------QDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNTSSTPN 284

  Fly   176 ----IPKQEFIDLGPIL--LEKNTSQLDMEDVLDELPQEELSQ---------------------- 212
                :...||.|...:|  :.....::.:||..|||...||:.                      
  Fly   285 SVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLL 349

  Fly   213 -----PRLDSTTSPASMEN---------------------DVKSE--MLDSCEGDDDFLPVDGQL 249
                 |......:|...||                     :.|.|  :..:||.::..|.|....
  Fly   350 PGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPNEQTLLVAPPA 414

  Fly   250 MDLVAVATTPNTLESTAEEKAKRGRMDCEKCGKV-------YRNRASYEK-----HLERECRRIE 302
            .....:.|.|..  :::.|:.:|..::..:..|:       .|..:|:|:     ....||.::|
  Fly   415 CQTPPIPTVPPA--NSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGDPDAEEPNECFQME 477

  Fly   303 RRVKVDKTTTT-----------CDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITAL 356
               .:|.:.|.           ||.||:..:|..|||.| :..|...:.:.||||.:...|.:||
  Fly   478 ---VLDTSLTEEAENKTRRKHFCDKCNRDFNSYNALKYH-QYTHNQERSHKCDSCERSFYTQSAL 538

  Fly   357 NEHKLVHTESRPFECTVCKAGFKNRARLKAH-YQIHAE-PSFVCNICGKKLQTRRTWNMHKVVHT 419
            ..|:..|:..:||:|..|:..|:....||.| ...|:: .:.:|..|||....|.:..:|:.:||
  Fly   539 KAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLVVHRRIHT 603

  Fly   420 EERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKHPQEVQQEDG 484
            .|:...|..|...|:.|..|.:|:..|||.|||.|:.|.|.|..:.:     ||:|         
  Fly   604 REKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGD-----LKRH--------- 654

  Fly   485 ARL--PSRLNVPTLDELR 500
            :|:  |||.:.|..::.:
  Fly   655 SRIHDPSRTSQPPAEKAK 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 17/78 (22%)
COG5048 <313..471 CDD:227381 53/170 (31%)
C2H2 Zn finger 314..335 CDD:275368 9/20 (45%)
C2H2 Zn finger 343..363 CDD:275368 8/19 (42%)
C2H2 Zn finger 371..391 CDD:275368 6/20 (30%)
C2H2 Zn finger 398..418 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..475 CDD:275368 6/20 (30%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 56/176 (32%)
C2H2 Zn finger 497..517 CDD:275368 9/20 (45%)
C2H2 Zn finger 525..545 CDD:275368 8/19 (42%)
C2H2 Zn finger 555..574 CDD:275371 5/18 (28%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
C2H2 Zn finger 610..630 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..658 CDD:275368 8/33 (24%)

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