DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17568 and Zfp93

DIOPT Version :10

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001100016.1 Gene:Zfp93 / 296399 RGDID:1309760 Length:427 Species:Rattus norvegicus


Alignment Length:376 Identity:88/376 - (23%)
Similarity:134/376 - (35%) Gaps:108/376 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PQEELSQP---RLDSTTSPAS-MENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTA 266
            ||.|.::|   ...:...||| :||..:...  ....:|.    |.|....||:.|      |.|
  Rat    17 PQPERNEPGGVAPRTAGEPASALENAAQKPA--GLPAEDS----DAQQPAAVALPT------SEA 69

  Fly   267 EEK-AKRGRMDCEKC-----GKVYRNRASYEKHLERECRRIERRVKVDKTTTTCDICNKTLSSAT 325
            :|: |..|......|     .|........::||     ||....|..|    |:.|:|..|...
  Rat    70 KERTATLGERTFNCCYPGCHFKTVHGMKDLDRHL-----RIHTGDKPHK----CEFCDKCFSRKD 125

  Fly   326 ALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESRPFECTVCKAGFKNRARLKAHYQI 390
            .|.:|.. .|.:|||:.|..|.......::|.:|..:|::.||::|.:|....:|.::|..|.:.
  Rat   126 NLTMHMR-CHTSVKPHKCHLCDYAAVDSSSLKKHLRIHSDERPYKCQMCPYASRNSSQLTVHLRS 189

  Fly   391 H-AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTH------------ 442
            | .:..|.|.:|..|.:.......|.:||:.|:..||:.|.........||:|            
  Rat   190 HTGDTPFQCWLCSAKFKISSDLKRHMIVHSGEKPFKCEFCDVRCTMKANLKSHIRIKHTFKCLHC 254

  Fly   443 ---------LLSHTGL--------------------------------RPYVCNYCGKSFACNAN 466
                     ||.|:.|                                ||:.|::|  ||...  
  Rat   255 AFQGRDRADLLEHSRLHQADHPEKCPECSYSCSSPAALRVHSRVHCKDRPFKCDFC--SFDTK-- 315

  Fly   467 CRSHKLKKHPQEVQQE------------DGARLPSRLNVPTLDELRVMTQK 505
             |...|.||..:|.:|            ||.|.....:|     ..::|||
  Rat   316 -RPSSLAKHIDKVHRERAKTENRAPQGKDGPRESGPHHV-----TNIVTQK 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 48/211 (23%)
C2H2 Zn finger 314..335 CDD:275368 6/20 (30%)
C2H2 Zn finger 343..363 CDD:275368 4/19 (21%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
C2H2 Zn finger 398..418 CDD:275368 4/19 (21%)
C2H2 Zn finger 426..446 CDD:275368 7/40 (18%)
C2H2 Zn finger 454..475 CDD:275368 6/20 (30%)
Zfp93NP_001100016.1 COG5048 <96..227 CDD:227381 38/140 (27%)
zf-H2C2_2 98..123 CDD:463886 9/33 (27%)
C2H2 Zn finger 114..134 CDD:275368 6/20 (30%)
C2H2 Zn finger 142..162 CDD:275368 4/19 (21%)
C2H2 Zn finger 170..190 CDD:275368 5/19 (26%)
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
C2H2 Zn finger 226..245 CDD:275368 5/18 (28%)
C2H2 Zn finger 279..299 CDD:275368 0/19 (0%)
C2H2 Zn finger 307..328 CDD:275368 8/25 (32%)
C2H2 Zn finger 364..384 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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