DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17568 and F58G1.2

DIOPT Version :9

Sequence 1:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001254358.1 Gene:F58G1.2 / 174931 WormBaseID:WBGene00010264 Length:500 Species:Caenorhabditis elegans


Alignment Length:430 Identity:91/430 - (21%)
Similarity:148/430 - (34%) Gaps:112/430 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DGDQEMDVAALRQ-QFGLCDDDWTHIIKPIPALEMESDNVYQKPAELLKDFPLAETSSQEMEISK 158
            |...|:|...:|| |...|..|    :..:||..:..|.:.....:.:....:.:....||.:.:
 Worm   123 DPSAELDKCIVRQKQQDFCAPD----LNMVPASSLSIDEIRNAVRKSMFRCKVCKNRFGEMSLLE 183

  Fly   159 RTTTTHLIQTKKNVEMEIPKQ--EFIDLGPILLEKNTSQLDMEDVLDELPQEELSQPRLDSTTS- 220
            |    ||..:.       ||.  .|::          :|.:|.|.:.||.:|   :.|::...| 
 Worm   184 R----HLRDSH-------PKAYIAFLE----------NQREMADYMGELERE---RNRIEELVSG 224

  Fly   221 ---PASMENDVKSEMLDSCEGDDDFLPVDGQ--------LMDLVAVATTPNTLESTAEEKAKRGR 274
               |...|.:..|..|:.     |.:|:.|:        |.....:....:.|........||. 
 Worm   225 GFIPPESEIEATSNNLEV-----DSIPLPGENSQGHIPRLNRYGGLMYPMDALRKKFPYLKKRS- 283

  Fly   275 MDCEKCGKVYRNRASYEKHLER---ECRRIERRV--------KVDKTTTTCDI------------ 316
            ..|..|.|.:||..|:..||.:   ||....:.:        ..|..|..||:            
 Worm   284 PQCPFCDKRFRNDISFNNHLTKKHPECAEFVQCLHCFKCLPSAADLPTHDCDLTYLCLDCRPIRN 348

  Fly   317 -CNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEH-KLVHTESRPFECTVCKAGFK 379
             ||.........|.|: |.|...:   |..|.::..|...|.:| |:.|..||.|:|..|:..|.
 Worm   349 MCNGYRLFRHRTKFHR-GYHSGFR---CPDCNQKFLTPRKLRKHRKMAHVFSRTFQCHFCEEFFI 409

  Fly   380 NRARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLL 444
            :...:                           .:|:.|||...:.:|.||.....|...::.|..
 Worm   410 SDTAV---------------------------TIHERVHTGILKFECTVCDFRASRYLQMEEHTK 447

  Fly   445 SHTGLRPYVCNYCGKSFACN--ANCRSHKLKKHPQEVQQE 482
            .|.|   |:|:.|  ...|.  .:.:.|.|.:|...|.:|
 Worm   448 EHHG---YMCSVC--QLKCQHWNDIKDHMLAEHSCYVTEE 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 36/173 (21%)
C2H2 Zn finger 314..335 CDD:275368 7/33 (21%)
C2H2 Zn finger 343..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 371..391 CDD:275368 3/19 (16%)
C2H2 Zn finger 398..418 CDD:275368 1/19 (5%)
C2H2 Zn finger 426..446 CDD:275368 5/19 (26%)
zf-H2C2_2 439..463 CDD:290200 6/23 (26%)
C2H2 Zn finger 454..475 CDD:275368 5/22 (23%)
F58G1.2NP_001254358.1 bZIP <186..222 CDD:304365 11/55 (20%)
C2H2 Zn finger 372..393 CDD:275368 6/20 (30%)
C2H2 Zn finger 401..421 CDD:275368 4/46 (9%)
C2H2 Zn finger 429..449 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.