DRSC/TRiP Functional Genomics Resources

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Protein Alignment brat and Rnf207

DIOPT Version :9

Sequence 1:NP_001188842.2 Gene:brat / 35197 FlyBaseID:FBgn0010300 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001028661.2 Gene:Rnf207 / 433809 MGIID:2684989 Length:635 Species:Mus musculus


Alignment Length:501 Identity:95/501 - (18%)
Similarity:155/501 - (30%) Gaps:156/501 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 NTSANGSPP-RCTACKSKCSDAVAK----CFECQSYLCANCVTAHEFMHCFNGHNVCLIKGFEAS 228
            ::|.:||.. ||..|..:||...|:    |..|...|||.|.........|..|::         
Mouse    87 DSSGDGSEAVRCANCDLECSQQDAETTYFCNTCGQPLCARCREETHRARMFARHDI--------- 142

  Fly   229 TTGTPLSVGSPSNNPASNEFKYASSLTMMLQQQQQLDSQQQQQQQQLLPAQPMSQLS---KIVLA 290
                 :::|..|.:..                           |:..|.::|....|   |.:|.
Mouse   143 -----VALGQRSRDVI---------------------------QKCTLHSEPYIMFSTDKKSLLC 175

  Fly   291 AAAQANSQEQQREDSIYGSLHPQQQQQQQQQQQRQLFCPRHKQELLKFSCRTCCILVCKECIVLE 355
            .....:.|.:.|...:  .|.....|.          |.|.:|.:|......   ...||.|.|.
Mouse   176 IRCFRDMQGESRAHCV--DLESAYVQG----------CERLEQAVLAVKALQ---TATKEAIALL 225

  Fly   356 HSTGLHELENVQSPGMTTSTGSTANESALQTLLADMRGKIGEIVGIAGNSDQNLTKVKLQYQKAH 420
            .|.    :|.|:.       .:...|:|:..|...|:.::.|...:.      |..|:.||::..
Mouse   226 QSM----VEEVRH-------SAAEEEAAIHALFGSMQDRMAERKALL------LQTVQSQYEEKD 273

  Fly   421 NELNETHQFFASMLDERKTELLKELETLYTAKVNSNNSWQQRSRDLIDKGLATCEAVER------ 479
            ....|.....||:|...:..|:.....|..|.          ..:.:|.|.   |.:||      
Mouse   274 KAFKEQLTHLASLLPTLQVHLVICSSFLSLAS----------KAEFLDLGY---ELMERLQGIVT 325

  Fly   480 -----SPAPPSSLLTE-ALLLRKSLEQQLQTGIQEMQLPFEIEFMSNYQSIQAGVRNTFGYIRAN 538
                 .||..|.:.:: .....:.||..|..|.:.     |:              :|.|  .||
Mouse   326 RPHRLRPAQSSKIASDHRAEFARCLEPLLLLGPRR-----EV--------------STVG--GAN 369

  Fly   539 SSDGGPTGMSLTSN------GHGKQPPIARPTQSASNSSASSAGSG------HHGHHQQSHHHGH 591
            :..||.:.|.|.:.      |.....|:.:|:.....|:......|      .|..|.:..:.|.
Mouse   370 TLSGGSSPMVLKTPSCPSPVGKMSGSPVQKPSPHRFISTKVLLAEGEDTPFTEHCRHYEDSYRGL 434

  Fly   592 HNHHQ-------------TAHHQQLQAQSSLHGLGLGLSGASLLDS 624
            ....|             |.||..::|:.    :|..|..:.|||:
Mouse   435 QVEVQNLKDQVQELHRDLTKHHSLIKAEI----MGDILRRSLLLDT 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bratNP_001188842.2 BBOX 176..222 CDD:197662 14/50 (28%)
zf-B_box 328..366 CDD:279037 10/37 (27%)
NHL_brat_like 760..1030 CDD:271329
NHL repeat 783..819 CDD:271329
NHL repeat 830..871 CDD:271329
NHL repeat 874..910 CDD:271329
NHL repeat 914..954 CDD:271329
NHL repeat 959..997 CDD:271329
NHL repeat 1002..1027 CDD:271329
Rnf207NP_001028661.2 RING 25..63 CDD:214546
zf-B_box 93..145 CDD:279037 15/65 (23%)
iSH2_PI3K_IA_R 202..321 CDD:304922 31/151 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 553..635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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