DRSC/TRiP Functional Genomics Resources

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Protein Alignment brat and CG8419

DIOPT Version :9

Sequence 1:NP_001188842.2 Gene:brat / 35197 FlyBaseID:FBgn0010300 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster


Alignment Length:759 Identity:131/759 - (17%)
Similarity:210/759 - (27%) Gaps:298/759 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ESYEHAGYLSDSPLTLSGSSPPASDS-----------------------AICSDEYTGGSSVKSR 61
            |.::....|:.||....|.|||.|.|                       .||.|.||        
  Fly   260 EVFDAPSPLTRSPSRSPGISPPVSPSPSITLRPSTPPENTVIFTDDLKCGICLDVYT-------- 316

  Fly    62 SEVTVINGHHPISASVSSSSSASSSSCSSSSSSSSSSSSSSSSTSGLSGCGSTSSSVISANNVAS 126
             :...::..|........|.:....|......:.|...|:.|..|.:.|..:..::.:|.   |.
  Fly   317 -DPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAELTATVSP---AR 377

  Fly   127 SNGPGVIGSNLQSSNNGGNSGISSLVVGA---GKGSNSSSNSSSSNTSANGSPPRCTACK----- 183
            ..|        .|........:..||:.:   ||.|.||..:..:.:.|:....||..|.     
  Fly   378 QRG--------SSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYP 434

  Fly   184 --------------------------------------SKCSDAVA---KCFECQSYLCANCVTA 207
                                                  |.|::.::   .|..|...||..|..|
  Fly   435 TDLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATYHCISCTLNLCTLCKEA 499

  Fly   208 HEFMHCFNGHNVCLIKGFEASTTGTPLSVGSPSNNPASNEFKYASSLTMMLQQQQQLDSQQQQQQ 272
            ||                                       :..|:.:..::...:|...::|:|
  Fly   500 HE---------------------------------------RQRSTASHRMRSILELRRARKQKQ 525

  Fly   273 QQLLPAQPMSQLSKIVLAAAAQANSQEQQREDSIYGSLHPQQQQQQQQQQQRQLFCPRHKQELLK 337
            ||:    .:...||:||.                                     |..|....||
  Fly   526 QQM----GLGDSSKLVLR-------------------------------------CGIHTNFELK 549

  Fly   338 FSCRTCCILVCKECIVLEHSTGLHELEN----VQSPGMTTSTGSTA-----NESALQTLLADMRG 393
            ..|..|..|.|.:|:|:.|....||..:    .|...:..:|..|.     .|.:::.|.|..| 
  Fly   550 AFCTNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPLCQYAEHSIERLNAIAR- 613

  Fly   394 KIGEIVGIAGNSDQNLTKVKLQYQKAHNELNETHQ-----------------FFASMLD-ERKTE 440
                  ||....|...|:|: :|.:.:.:....|:                 .....|| |::|:
  Fly   614 ------GINDRCDDIQTQVE-RYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQLDLEKRTQ 671

  Fly   441 ---------------------------LLKELETL----------------YTAKVNSNNSWQQR 462
                                       ||:.||..                :..|:.:.::..| 
  Fly   672 QAMDAVRFSQELCEIGADVEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFLPKIRAPSTKDQ- 735

  Fly   463 SRDLIDKGLATCEAVERSPAPPSSLLTE-----ALLLRKSLEQQLQT----GIQEMQLPFEIEFM 518
             ||:...|:.|.:.||     ||....|     .|.|.|..:..|.:    |:.......||..|
  Fly   736 -RDIPLYGIITMQVVE-----PSLCTLEWEGFSQLRLHKKADLLLHSRDADGVSLCHGGLEINCM 794

  Fly   519 SNYQSIQAGVRNTFGYIRANSSDGGPTGMSLTSNGHG--------KQPPI-----------ARPT 564
            ..|:...    :.|..:..:.:..|...:|.|.:..|        ...||           .||.
  Fly   795 LKYKDSS----SKFLPVEVSDNRDGTYNISFTPDAQGTLILTITINDRPIKGGPFTFQARQVRPH 855

  Fly   565 QSASNSSASSAGSGH-------HGH--HQQSHHHGHHNHHQTAH 599
            ....:..:..:|.|:       .||  ......|||..|....|
  Fly   856 TGIYHCCSFCSGKGNRNVMCSCEGHMPGYSGCGHGHAGHPGRRH 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bratNP_001188842.2 BBOX 176..222 CDD:197662 13/91 (14%)
zf-B_box 328..366 CDD:279037 13/41 (32%)
NHL_brat_like 760..1030 CDD:271329
NHL repeat 783..819 CDD:271329
NHL repeat 830..871 CDD:271329
NHL repeat 874..910 CDD:271329
NHL repeat 914..954 CDD:271329
NHL repeat 959..997 CDD:271329
NHL repeat 1002..1027 CDD:271329
CG8419NP_609193.1 RING 308..>334 CDD:214546 6/34 (18%)
zf-B_box 537..576 CDD:279037 15/75 (20%)
iSH2_PI3K_IA_R 583..703 CDD:304922 20/127 (16%)
Filamin 748..846 CDD:279024 21/106 (20%)
IG_FLMN 751..849 CDD:214720 19/101 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447033
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.940

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