Protein Alignment brat and Nhlrc3

DIOPT Version :10

• Sequence 1: NP_001188842.2
• Gene: brat / 35197
• FlyBaseID: FBgn0010300
• Length: 1061
• Species: Drosophila melanogaster
• Sequence 2: XP_008759239.3
• Gene: Nhlrc3 / 310416
• RGDID: 1565414
• Length: 368
• Species: Rattus norvegicus
• Alignment Length: 264
• Identity: 53/264 - (20%)
• Similarity: 101/264 - (38%)
• Gaps: 80/264 - (30%)

  Fly   867 GATILQHPRGVTVDNKGRIIVVECK---VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND---K 925
            |||..     |.||:...::.|..:   :.:|::|.::|..|..:..:  ::.|:|:.|:.   :
  Rat    82 GATFC-----VAVDSLNGLVYVAQRGDDIPKVLVFSEDGYFLRAWNYT--VDTPHGMFVSGTPYE 139

  Fly   926 QEIFISD----NRAHCVKVFNYEGQYLRQIG-----GEGIT----NYPIGVGINSNGEILIADNH 977
            |.::|:|    ...|.||.:|..|..::.:|     |.|:.    :.|..:.::..|||.|.|..
  Rat   140 QSVWITDVGSGPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNPLQFDNPAELYVDDTGEIYIVDGD 204

  Fly   978 NNFN--LTIFTQDGQLI--------SALESKVKHAQCFDVALMDDGSVVLASK-DYRLYIY---- 1027
            ...|  |...:||..::        ...:..:.|:    |.|...|.|.:|.: :.||.::
  Rat   205 GGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHS----VTLDSVGRVWVADRGNKRLQVFDKDT 265

  Fly  1028 -------------------------RYVQLAPVVLHKLH----------SNINETSKSFLADRIQ 1057
                                     ||:.:|.:.|.:|.          .:....|...|||.:.
  Rat   266 GEWLGAWDNCFTEEGPSAVRFTPDGRYLIVAQLNLSRLSLLAAPPSGSIGDCTVVSTIQLADEVL 330

  Fly  1058 QHFI 1061
            .|.:
  Rat   331 PHLL 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
brat	NP_001188842.2	Bbox1_BRAT-like	178..222	CDD:380871
		Bbox2_BRAT-like	326..366	CDD:380856
		CC_brat-like	382..503	CDD:467844
		NHL_brat_like	760..1030	CDD:271329	44/221 (20%)
		NHL repeat	783..819	CDD:271329
		NHL repeat	830..871	CDD:271329	3/3 (100%)
		NHL repeat	874..910	CDD:271329	8/38 (21%)
		NHL repeat	914..954	CDD:271329	12/51 (24%)
		NHL repeat	959..997	CDD:271329	10/47 (21%)
		NHL repeat	1002..1027	CDD:271329	7/25 (28%)
Nhlrc3	XP_008759239.3	None