Protein Alignment l(2)37Cg and NRPB11

DIOPT Version :9

• Sequence 1: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Sequence 2: NP_001190064.1
• Gene: NRPB11 / 824372
• AraportID: AT3G52090
• Length: 146
• Species: Arabidopsis thaliana
• Alignment Length: 115
• Identity: 27/115 - (23%)
• Similarity: 44/115 - (38%)
• Gaps: 37/115 - (32%)

  Fly    46 TFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQK-------------------------- 84
            :|....|.||:||.::..:.|...|.|.||.:|||.:.|
plant    32 SFTVEREDHTIGNIVRMQLHRDENVLFAGYQLPHPLKYKIIVRDPKDWFRNLKVVYGCLETVNIS 96

  Fly    85 --------LHFRIQSRRDRAIDILKRGLEDLEGLCDHTIVTFEKEMAEFN 126
                    :|...||...:|.:   :.:.||:...|:....||.|:|:|:
plant    97 WFKLLVLTIHTTSQSSPMQAYN---QAINDLDKELDYLKNQFEAEVAKFS 143

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	22/105 (21%)
		RNA_pol_L	46..>80	CDD:279526	12/33 (36%)
NRPB11	NP_001190064.1	RNAP_II_RPB11	13..135	CDD:132902	22/105 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820