Protein Alignment l(2)37Cg and RPC14

DIOPT Version :9

• Sequence 1: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Sequence 2: NP_001077977.1
• Gene: RPC14 / 817503
• AraportID: AT2G29540
• Length: 139
• Species: Arabidopsis thaliana
• Alignment Length: 87
• Identity: 23/87 - (26%)
• Similarity: 39/87 - (44%)
• Gaps: 22/87 - (25%)

  Fly    68 PEVDFCGYTIPHPTEQKLHFRIQSRRDRAIDILKRGLEDLEGLCDHTIVTFEKEMAE-------- 124
            |.|....||||||:.::::.|:|:..|.|.::.|...::|..:..|....|:|.:||
plant    52 PRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYKDEQKRK 116

  Fly   125 --------------FNAMKVEN 132
                          |.:|.:||
plant   117 EEAEEEELKRQRDLFGSMDIEN 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	15/49 (31%)
		RNA_pol_L	46..>80	CDD:279526	6/11 (55%)
RPC14	NP_001077977.1	RNAP_RPB11_RPB3	<52..102	CDD:299707	15/49 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	1	1.000	-	-		FOG0004757
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_102491
Panther	1	1.100	-	-	LDO	PTHR13946
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.780