Protein Alignment l(2)37Cg and polr2j

DIOPT Version :9

• Sequence 1: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Sequence 2: NP_001039095.1
• Gene: polr2j / 733914
• XenbaseID: XB-GENE-972012
• Length: 117
• Species: Xenopus tropicalis
• Alignment Length: 48
• Identity: 20/48 - (41%)
• Similarity: 30/48 - (62%)
• Gaps: 0/48 - (0%)

  Fly    47 FVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRD 94
            |....|.||:||.:|:.:.:.|:|.|.||.:|||.|.|:..|:|:..|
 Frog    33 FTINKEDHTIGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 80

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	20/48 (42%)
		RNA_pol_L	46..>80	CDD:279526	13/32 (41%)
polr2j	NP_001039095.1	RNAP_II_RPB11	14..105	CDD:132902	20/48 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010