Protein Alignment l(2)37Cg and polr1d

DIOPT Version :9

• Sequence 1: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Sequence 2: NP_001003888.1
• Gene: polr1d / 445412
• ZFINID: ZDB-GENE-040930-4
• Length: 112
• Species: Danio rerio
• Alignment Length: 85
• Identity: 41/85 - (48%)
• Similarity: 57/85 - (67%)
• Gaps: 1/85 - (1%)

  Fly    42 EGSRTFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRD-RAIDILKRGLE 105
            ||..|||...|.|||||:|:.:|.:..:|:||||:|.||:|.|::||||:|.. .|.:.|:.||.
Zfish    20 EGCVTFVLNEEDHTLGNSLRYMIMKSQDVEFCGYSITHPSESKINFRIQTRDGVPASEPLRNGLN 84

  Fly   106 DLEGLCDHTIVTFEKEMAEF 125
            :|..:|.|.:.|||..|.||
Zfish    85 NLTDVCKHVLQTFEARMKEF 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	35/76 (46%)
		RNA_pol_L	46..>80	CDD:279526	17/33 (52%)
polr1d	NP_001003888.1	RNAP_I_III_AC19	13..97	CDD:132907	35/76 (46%)
		RNA_pol_L	24..>55	CDD:279526	16/30 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170590169
Domainoid	1	1.000	71	1.000	Domainoid score	I9399
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H22239
Inparanoid	1	1.050	85	1.000	Inparanoid score	I5149
OMA	1	1.010	-	-		QHG53905
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	1	1.000	-	-		FOG0004757
OrthoInspector	1	1.000	-	-		otm26581
orthoMCL	1	0.900	-	-		OOG6_102491
Panther	1	1.100	-	-	LDO	PTHR13946
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1181
SonicParanoid	1	1.000	-	-		X3912
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	17	16.800