Protein Alignment l(2)37Cg and rpc19

DIOPT Version :9

• Sequence 1: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Sequence 2: NP_593118.2
• Gene: rpc19 / 2542799
• PomBaseID: SPAC1687.01
• Length: 125
• Species: Schizosaccharomyces pombe
• Alignment Length: 89
• Identity: 40/89 - (44%)
• Similarity: 60/89 - (67%)
• Gaps: 1/89 - (1%)

  Fly    44 SRTFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSR-RDRAIDILKRGLEDL 107
            |.||....|.|||||:|:.:|.:.|||:||||:||||:|.|::||||:. ...|:|:|::||:||
pombe    34 SVTFQIQKEDHTLGNSLRYVIMKNPEVEFCGYSIPHPSEAKMNFRIQTAPSTTAVDVLRKGLDDL 98

  Fly   108 EGLCDHTIVTFEKEMAEFNAMKVE 131
            ..|||.....|.:::....:..:|
pombe    99 IDLCDAVTEKFTEQLPRDTSTTME 122

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	38/74 (51%)
		RNA_pol_L	46..>80	CDD:279526	19/33 (58%)
rpc19	NP_593118.2	RNAP_I_III_AC19	25..109	CDD:132907	38/74 (51%)
		RNA_pol_L	36..102	CDD:279526	34/65 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	83	1.000	Domainoid score	I2268
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H22239
Inparanoid	1	1.050	86	1.000	Inparanoid score	I1792
OMA	1	1.010	-	-		QHG53905
OrthoFinder	1	1.000	-	-		FOG0004757
OrthoInspector	1	1.000	-	-		oto101839
orthoMCL	1	0.900	-	-		OOG6_102491
Panther	1	1.100	-	-	LDO	PTHR13946
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1181
SonicParanoid	1	1.000	-	-		X3912
TreeFam	1	0.960	-	-
	14	13.860