Protein Alignment l(2)37Cg and rpb-11

DIOPT Version :9

• Sequence 1: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Sequence 2: NP_496942.1
• Gene: rpb-11 / 175056
• WormBaseID: WBGene00012187
• Length: 122
• Species: Caenorhabditis elegans
• Alignment Length: 84
• Identity: 34/84 - (40%)
• Similarity: 44/84 - (52%)
• Gaps: 6/84 - (7%)

  Fly    38 EKNGEGSRTFVFT--NEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRDRA-IDI 99
            ||:.:.....:||  .|.|||||.||..:.:.|||.|.||..|||.|.|:..|||:..:.. .|.
 Worm    21 EKDTKVPNAAIFTIMKEDHTLGNMLKIQLLKDPEVLFAGYKNPHPLEHKILLRIQTTNNTTPADA 85

  Fly   100 LKRGLEDLEG---LCDHTI 115
            |...:.||.|   |.:|.|
 Worm    86 LTTAITDLVGELSLLEHRI 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	34/84 (40%)
		RNA_pol_L	46..>80	CDD:279526	17/35 (49%)
rpb-11	NP_496942.1	RNAP_II_RPB11	14..103	CDD:132902	32/81 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820